Gene Sala_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0016 
Symbol 
ID4083147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp11849 
End bp12523 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID638008376 
Productglutathione S-transferase-like protein 
Protein accessionYP_615075 
Protein GI103485514 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0486825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCGA TCAACCCCGA CGCCGCCATC GTGCTCACTG CCTTTGACTG GGTTCCCGAT 
TTCGCGCGCG GCTTTGTCCG CGACCTGCGC CCGCGCTGGG CATGCGAGGA AATCGGCCTC
GATTATGCCG AGCATCTGAT CAGCGCGGTC AACCGCCCCG CCGACCATTT CCTGTTCCAG
CCCTGGGGGC AGGTGCCGGT GCTCAACGAC GGCGGCATCC GTTTGTTCGA AAGCGGCGCG
ATCCTGCTTC ACCTCGCCGA AAAGGACGAA CGGCTGATGC CGCGCGATGC GCAGGGCCGC
GCCAACACAC TCGCCTGGCT GTTCGCCGCC TATAACAGCG TCGAACCGAT GCTGTTCGAA
CTGGGCAATG TCGATATTTT CTCGAAGGAC GAGGAATGGG CGAAGCTCCG CCGCCCCGGC
CTGATCGACT TCATTCGTGG CCGGCTCGGC CGTCTCAACG ACGCGATGGG CGACAAACCC
TATCTGACCG GCGACTTCAC CGTCGCCGAC ATTGCGATGG CGACCGTGCT GCGCGAAGCC
GTCGAGGCGG GACTGATCGC CGAACAGCCG CGGCTCCAGG CCTATCTCGA CCGATGCCTG
GCACGGCCTG CCTTTCGACG TGCGCTCGAC GCGCAGCTTG CCGCGTTCCG TGAAGAGGCG
GGTCCGCCTG CCTGA
 
Protein sequence
MMPINPDAAI VLTAFDWVPD FARGFVRDLR PRWACEEIGL DYAEHLISAV NRPADHFLFQ 
PWGQVPVLND GGIRLFESGA ILLHLAEKDE RLMPRDAQGR ANTLAWLFAA YNSVEPMLFE
LGNVDIFSKD EEWAKLRRPG LIDFIRGRLG RLNDAMGDKP YLTGDFTVAD IAMATVLREA
VEAGLIAEQP RLQAYLDRCL ARPAFRRALD AQLAAFREEA GPPA