Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0014 |
Symbol | |
ID | 4083145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 10373 |
End bp | 11044 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638008374 |
Product | glutathione S-transferase-like protein |
Protein accession | YP_615073 |
Protein GI | 103485512 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.198681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0539534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATCA AACTTTACGG AACCCCGCCG ACCCGCGCCC TGCGCGCGAT CTGGCTGCTC AATGAACTCG ACCTGCCGCA CGAGATCATC CCGATCGACC TCGGCGCGGG CGAACAGTTG ACGCCCGATT TTATGGCGCT CAACCCCGCC GCCAAGCTGC CGGTGCTCGT CGATGGCGCC ATGGTGGTCA GCGAATCGGC GGCGATCCAG CTCTATCTCG CCGACAAATA TGGCGAACGC TTCCCCGGCG GCGGGCTGAT CCCCGCCACT GCCGAAGATC GCGGCCGCAT GTATCACTGG CTGTTCTTCC TGATGACCGA GATCGAGGCA CCGCTGTGGC GGATCGCGCT CCACAATTTC ATCTATGATC CCGAGGAAAA GTCGGAGGCC GAAATCGCGC TGGCGAAGCG CGACGCCGCA CGGATGGTTG CAGTGCTCGA ACAGCATATG CAGGGGCGCG ACGTCCTGGT CGGCGACGCG CTGACGGTGG CCGATTTCAA CGCCGCCTTC ACGCTCGACT GGGCGCGCGA GGAAGCGCTG CTGGACGATG CCCCGGCGCT CCGCGCCTTT CTGGACCGCA TGTACGCGCG GCCCAGGGCG CCGGTGACGA TCGCTGCGGC ATTTGCGGCG CTGGAGGCGG TGGCCGCCGA CGCCGACGGG GCGAGGGCTT GA
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Protein sequence | MMIKLYGTPP TRALRAIWLL NELDLPHEII PIDLGAGEQL TPDFMALNPA AKLPVLVDGA MVVSESAAIQ LYLADKYGER FPGGGLIPAT AEDRGRMYHW LFFLMTEIEA PLWRIALHNF IYDPEEKSEA EIALAKRDAA RMVAVLEQHM QGRDVLVGDA LTVADFNAAF TLDWAREEAL LDDAPALRAF LDRMYARPRA PVTIAAAFAA LEAVAADADG ARA
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