Gene Sala_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0002 
Symbol 
ID4082957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1682 
End bp2353 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content67% 
IMG OID638008362 
Productglutathione S-transferase-like protein 
Protein accessionYP_615061 
Protein GI103485500 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0515777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCT TTATCGGCAA CAAGGCCTAT TCGAGCTGGA GCCTGCGCGG CTGGCTCGCC 
GCCAGGCACA GCGGCCTGCC GTTCGAGGAG GTCACCGTCC CGCTCTACAA CGAAGAGTGG
AACCAGCGGC GCGAGGGCGA CGAGTTCGCG CCGTCGGGCG GCAAGGTGCC GATCCTGTGG
GACGGCGCCG ACATCGTCGT GTGGGACAGC CTGGCGATCA TCGACTATCT CAACGAAAAG
ACCGGCGGGA CGCGCGGATA CTGGCCCGAC GATATGGCGG CGCGCGCGAT GGCGCGGTCG
ATGGCGGCCG AAATGCACTC GAGCTTTGCG GCGCTGCGCC GCGAGCACAG CATGAACATC
CGCCGCATCT ATCCCGCCGC CGAGCTCACC CCCGAAGTGC AGGCCGACGT GATCCGCATC
CTCCAGATCT GGGCCGAAGC GCGCGCGCGG TTCGGCGGCG AAGGCGACTA TCTGTTCGGC
GACTGGTCGG CGGCCGACAT GATGTTCGCG CCGGTGGTGA CGCGCTTCAT CACTTACTCG
ATCCCGCTGC CCCGCTTTGC CCTGCCCTAT GCACAGGCGG TGATCAGCCA CCCGCACATG
CAGGAATGGA TCGGCGGCGC ACAGGCCGAG GACTGGGTGA TCGAGAAGTT CGAGGGGCCG
GTCGAGGGAT AG
 
Protein sequence
MKLFIGNKAY SSWSLRGWLA ARHSGLPFEE VTVPLYNEEW NQRREGDEFA PSGGKVPILW 
DGADIVVWDS LAIIDYLNEK TGGTRGYWPD DMAARAMARS MAAEMHSSFA ALRREHSMNI
RRIYPAAELT PEVQADVIRI LQIWAEARAR FGGEGDYLFG DWSAADMMFA PVVTRFITYS
IPLPRFALPY AQAVISHPHM QEWIGGAQAE DWVIEKFEGP VEG