Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0002 |
Symbol | |
ID | 4082957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1682 |
End bp | 2353 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638008362 |
Product | glutathione S-transferase-like protein |
Protein accession | YP_615061 |
Protein GI | 103485500 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0515777 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTCT TTATCGGCAA CAAGGCCTAT TCGAGCTGGA GCCTGCGCGG CTGGCTCGCC GCCAGGCACA GCGGCCTGCC GTTCGAGGAG GTCACCGTCC CGCTCTACAA CGAAGAGTGG AACCAGCGGC GCGAGGGCGA CGAGTTCGCG CCGTCGGGCG GCAAGGTGCC GATCCTGTGG GACGGCGCCG ACATCGTCGT GTGGGACAGC CTGGCGATCA TCGACTATCT CAACGAAAAG ACCGGCGGGA CGCGCGGATA CTGGCCCGAC GATATGGCGG CGCGCGCGAT GGCGCGGTCG ATGGCGGCCG AAATGCACTC GAGCTTTGCG GCGCTGCGCC GCGAGCACAG CATGAACATC CGCCGCATCT ATCCCGCCGC CGAGCTCACC CCCGAAGTGC AGGCCGACGT GATCCGCATC CTCCAGATCT GGGCCGAAGC GCGCGCGCGG TTCGGCGGCG AAGGCGACTA TCTGTTCGGC GACTGGTCGG CGGCCGACAT GATGTTCGCG CCGGTGGTGA CGCGCTTCAT CACTTACTCG ATCCCGCTGC CCCGCTTTGC CCTGCCCTAT GCACAGGCGG TGATCAGCCA CCCGCACATG CAGGAATGGA TCGGCGGCGC ACAGGCCGAG GACTGGGTGA TCGAGAAGTT CGAGGGGCCG GTCGAGGGAT AG
|
Protein sequence | MKLFIGNKAY SSWSLRGWLA ARHSGLPFEE VTVPLYNEEW NQRREGDEFA PSGGKVPILW DGADIVVWDS LAIIDYLNEK TGGTRGYWPD DMAARAMARS MAAEMHSSFA ALRREHSMNI RRIYPAAELT PEVQADVIRI LQIWAEARAR FGGEGDYLFG DWSAADMMFA PVVTRFITYS IPLPRFALPY AQAVISHPHM QEWIGGAQAE DWVIEKFEGP VEG
|
| |