Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0001 |
Symbol | dnaA |
ID | 4082956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 173 |
End bp | 1534 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638008361 |
Product | chromosomal replication initiation protein |
Protein accession | YP_615060 |
Protein GI | 103485499 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.115024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGTG ATGCCGCAGC GCTCTGGCCG CGCGTCGCCG AGGGCCTGCG CCGCGACCTT GGCGCCCGCA CCTTCGATCA TTGGCTCAAG CCCGTGCGCT TCGCCGACTA TTGCGCGCTG TCGGGCGTGG TGACGCTGGA GACCGCGAGC CGTTTTTCGG CGAACTGGAT CAACGAACGC TTCGGTGACC GGCTCGAACT CGCGTGGCGG CAGCAATTGC CTGCGGTACG CAGCGTCAGC GTGCGCGGCG GCGTGGCGGC GACCGAGCGC GCCGCAACGC TGGCCTCGGT GCCACTTCCC ACGTTCGACG CGCCGGCCGC TCCCGCGGCC AACCCCGCGC TGCTCGGTTT CGACCCGCGG CTGTCGTTCG ACCGCTTTGT CGTCGCGCGC TCGAACATCC TCGCCGCCAA CGCCGCGCGC CGGATGGCGA TGGTCGAGCG GCCGCAGTTC AACCCGCTCT ATCTCTGTTC GGGCACCGGG CAGGGCAAGA CGCATCTCCT GCAAGCGATC GCGCAGGATT ATGCCGCCGC ACACCCGACC GCGACGATCA TCCTGATGTC GGCGGAAAAG TTCATGCTCG AATTCGTCGG CGCGATGCGC GGCGGCGACA TGATGGCGTT CAAGGCGCGG CTGCGCGCCG CCGATCTGTT GCTGCTCGAC GATCTGCAAT TCGTTATCGG CAAGAATTCG ACGCAGGAGG AACTGCTCCA CACGATCGAC GACCTGATGA CGGCGGGCAA GCGCCTTGTC GTCACCGCCG ACCGTCCGCC TGCGATGCTC GACGGGGTCG AGGCGCGGCT CTTGTCGCGC CTGTCGGGCG GGCTCGTCGC CGATATCGAG GCGCCCGAGG ATGATTTGCG CGAACGCATC ATCCGCCAGC GGCTCGCCGC GATGCCGATG GTCGAGGTGC CCGACGATGT CATCGCCTGG CTGGTCAAGC ATTTCACGCG CAATATCCGC GAGCTCGAGG GCGCGCTCAA CAAGCTGCTC GCTTATGCCG CGCTCACCGG CGCGCGCATC GACCTCATGC TCGCCGAAGA CCGGCTTGCC GAAAATGTCC GCTCGGCGCG CCCGCGCATC ACGATCGACG AGATCCAGCG CGCGGTGTGC GCGCACTACC GGCTCGACAG ATCGGACATG AGCTCGAAGC GCCGCGTCCG CGCGGTCGCC CGCCCGCGTC AGGTCGCCAT GTATCTGGCG AAGGAACTCA CGCCGCGCTC CTATCCCGAA ATCGGGCGCC GTTTCGGTGG CCGCGACCAT TCGACGGTGA TCCACGCCGT GCGCACGGTC GAGGCGTTGC GCGTCGCCGA CAGCGAACTC GACGCCGAAA TCGCCGCGAT CCGGCGCAGT CTCAACAGCT GA
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Protein sequence | MSGDAAALWP RVAEGLRRDL GARTFDHWLK PVRFADYCAL SGVVTLETAS RFSANWINER FGDRLELAWR QQLPAVRSVS VRGGVAATER AATLASVPLP TFDAPAAPAA NPALLGFDPR LSFDRFVVAR SNILAANAAR RMAMVERPQF NPLYLCSGTG QGKTHLLQAI AQDYAAAHPT ATIILMSAEK FMLEFVGAMR GGDMMAFKAR LRAADLLLLD DLQFVIGKNS TQEELLHTID DLMTAGKRLV VTADRPPAML DGVEARLLSR LSGGLVADIE APEDDLRERI IRQRLAAMPM VEVPDDVIAW LVKHFTRNIR ELEGALNKLL AYAALTGARI DLMLAEDRLA ENVRSARPRI TIDEIQRAVC AHYRLDRSDM SSKRRVRAVA RPRQVAMYLA KELTPRSYPE IGRRFGGRDH STVIHAVRTV EALRVADSEL DAEIAAIRRS LNS
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