Gene Sala_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0001 
SymboldnaA 
ID4082956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp173 
End bp1534 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content68% 
IMG OID638008361 
Productchromosomal replication initiation protein 
Protein accessionYP_615060 
Protein GI103485499 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.115024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGTG ATGCCGCAGC GCTCTGGCCG CGCGTCGCCG AGGGCCTGCG CCGCGACCTT 
GGCGCCCGCA CCTTCGATCA TTGGCTCAAG CCCGTGCGCT TCGCCGACTA TTGCGCGCTG
TCGGGCGTGG TGACGCTGGA GACCGCGAGC CGTTTTTCGG CGAACTGGAT CAACGAACGC
TTCGGTGACC GGCTCGAACT CGCGTGGCGG CAGCAATTGC CTGCGGTACG CAGCGTCAGC
GTGCGCGGCG GCGTGGCGGC GACCGAGCGC GCCGCAACGC TGGCCTCGGT GCCACTTCCC
ACGTTCGACG CGCCGGCCGC TCCCGCGGCC AACCCCGCGC TGCTCGGTTT CGACCCGCGG
CTGTCGTTCG ACCGCTTTGT CGTCGCGCGC TCGAACATCC TCGCCGCCAA CGCCGCGCGC
CGGATGGCGA TGGTCGAGCG GCCGCAGTTC AACCCGCTCT ATCTCTGTTC GGGCACCGGG
CAGGGCAAGA CGCATCTCCT GCAAGCGATC GCGCAGGATT ATGCCGCCGC ACACCCGACC
GCGACGATCA TCCTGATGTC GGCGGAAAAG TTCATGCTCG AATTCGTCGG CGCGATGCGC
GGCGGCGACA TGATGGCGTT CAAGGCGCGG CTGCGCGCCG CCGATCTGTT GCTGCTCGAC
GATCTGCAAT TCGTTATCGG CAAGAATTCG ACGCAGGAGG AACTGCTCCA CACGATCGAC
GACCTGATGA CGGCGGGCAA GCGCCTTGTC GTCACCGCCG ACCGTCCGCC TGCGATGCTC
GACGGGGTCG AGGCGCGGCT CTTGTCGCGC CTGTCGGGCG GGCTCGTCGC CGATATCGAG
GCGCCCGAGG ATGATTTGCG CGAACGCATC ATCCGCCAGC GGCTCGCCGC GATGCCGATG
GTCGAGGTGC CCGACGATGT CATCGCCTGG CTGGTCAAGC ATTTCACGCG CAATATCCGC
GAGCTCGAGG GCGCGCTCAA CAAGCTGCTC GCTTATGCCG CGCTCACCGG CGCGCGCATC
GACCTCATGC TCGCCGAAGA CCGGCTTGCC GAAAATGTCC GCTCGGCGCG CCCGCGCATC
ACGATCGACG AGATCCAGCG CGCGGTGTGC GCGCACTACC GGCTCGACAG ATCGGACATG
AGCTCGAAGC GCCGCGTCCG CGCGGTCGCC CGCCCGCGTC AGGTCGCCAT GTATCTGGCG
AAGGAACTCA CGCCGCGCTC CTATCCCGAA ATCGGGCGCC GTTTCGGTGG CCGCGACCAT
TCGACGGTGA TCCACGCCGT GCGCACGGTC GAGGCGTTGC GCGTCGCCGA CAGCGAACTC
GACGCCGAAA TCGCCGCGAT CCGGCGCAGT CTCAACAGCT GA
 
Protein sequence
MSGDAAALWP RVAEGLRRDL GARTFDHWLK PVRFADYCAL SGVVTLETAS RFSANWINER 
FGDRLELAWR QQLPAVRSVS VRGGVAATER AATLASVPLP TFDAPAAPAA NPALLGFDPR
LSFDRFVVAR SNILAANAAR RMAMVERPQF NPLYLCSGTG QGKTHLLQAI AQDYAAAHPT
ATIILMSAEK FMLEFVGAMR GGDMMAFKAR LRAADLLLLD DLQFVIGKNS TQEELLHTID
DLMTAGKRLV VTADRPPAML DGVEARLLSR LSGGLVADIE APEDDLRERI IRQRLAAMPM
VEVPDDVIAW LVKHFTRNIR ELEGALNKLL AYAALTGARI DLMLAEDRLA ENVRSARPRI
TIDEIQRAVC AHYRLDRSDM SSKRRVRAVA RPRQVAMYLA KELTPRSYPE IGRRFGGRDH
STVIHAVRTV EALRVADSEL DAEIAAIRRS LNS