| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_R0002 |
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| Symbol | |
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| ID | 4076606 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 144962 |
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| End bp | 146416 |
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| Gene Length | 1455 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | 640715113 |
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| Product | 16S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0087575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AGAGTTTGAT CCTGGCTCAG AACGAACGCT GGCGGCAGGC CTAACACATG CAAGTCGAGC
GAGATCTTCG GATCTAGCGG CGGACGGGTT AGTAACGCGT GGGAACGTAC CCAAAGGTAG
GGAATAGCCA CTGGAAACGG TGAGTAATAC CCTATGTGCC CTTCGGGGGA AAGATTTATC
GCCTTTGGAT CGGCCCGCGT TAGATTAGGT AGTTGGTGGG GTAACGGCCT ACCAAGCCTA
CGATCTATAG CTGGTTTTAG AGGATGATCA GCAACACTGG GACTGAGACA CGGCCCAGAC
TCCTACGGGA GGCAGCAGTG GGGAATCTTG GACAATGGGG GCAACCCTGA TCCAGCCATG
CCGCGTGAGT GATGAAGGCC CTAGGGTCGT AAAGCTCTTT CGCCAGGGAT GATAATGACA
GTACCTGGTA AAGAAACCCC GGCTAACTCC GTGCCAGCAG CCGCGGTAAT ACGGAGGGGG
TTAGCGTTGT TCGGAATTAC TGGGCGTAAA GCGCGCGTAG GCGGACTGGA AAGTTGGGGG
TGAAATCCCA GGGCTCAACC CTGGAACTGC CTCCAAAACT ATCAGTCTAG AGTTCGAGAG
AGGTGAGTGG AATTCCGAGT GTAGAGGTGA AATTCGTAGA TATTCGGAGG AACACCAGTG
GCGAAGGCGG CTCACTGGCT CGATACTGAC GCTGAGGTGC GAAAGTGTGG GGAGCAAACA
GGATTAGATA CCCTGGTAGT CCACACCGTA AACGATGAAT GCCAGTCGTC GGGTAGCATG
CTATTCGGTG ACACACCTAA CGGATTAAGC ATTCCGCCTG GGGAGTACGG TCGCAAGATT
AAAACTCAAA GGAATTGACG GGGGCCCGCA CAAGCGGTGG AGCATGTGGT TTAATTCGAA
GCAACGCGCA GAACCTTACC AACCCTTGAC ATCCTCGGAC CGCCAGAGAG ATTTGGCTTT
CACTTCGGTG ACCGAGTGAC AGGTGCTGCA TGGCTGTCGT CAGCTCGTGT CGTGAGATGT
TCGGTTAAGT CCGGCAACGA GCGCAACCCA CATCCTTAGT TGCCAGCAGT TCGGCTGGGC
ACTCTAAGGA AACTGCCCGT GATAAGCGGG AGGAAGGTGT GGATGACGTC AAGTCCTCAT
GGCCCTTACG GGTTGGGCTA CACACGTGCT ACAATGGCAG TGACAATGGG TTAATCCCAA
AAAACTGTCT CAGTTCGGAT TGGGGTCTGC AACTCGACCC CATGAAGTCG GAATCGCTAG
TAATCGCGTA ACAGCATGAC GCGGTGAATA CGTTCCCGGG CCTTGTACAC ACCGCCCGTC
ACACCATGGG AGTTGGTTCT ACCCGACGAC GCTGCGCTAA CCTTCGGGGG GCAGGCGGCC
ACGGTAGGAT CAGCGACTGG GGTGAAGTCG TAACAAGGTA GCCGTAGGGG AACCTGCGGC
TGGATCACCT CCTTT
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| Protein sequence | |
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