| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3031 |
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| Symbol | rpsT |
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| ID | 4076604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3200122 |
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| End bp | 3200385 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638008360 |
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| Product | 30S ribosomal protein S20 |
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| Protein accession | YP_615025 |
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| Protein GI | 99082871 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0268] Ribosomal protein S20 |
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| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.362644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.541677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAACT CTCCTCAGGC TAAGAAGCGC GCACGTCAGA ACGAAAAGCG CTTTGCCATC
AACAAAGCTC GTCGTTCGCG CATCCGCACT TTCCTGCGTA AAGTTGAAGA AGCCATCGCA
TCCGGTGACA AAGAAGCAGC GACCGCAGCT CTGCGTGCCG CACAGCCTGA ACTGATGCGC
GGTGTGACCC GCGGCGTTTA CCACAAAAAC ACCGCTTCCC GCAAAATTTC GCGCCTGGCC
GCACGCGTAA AAGCACTCGG CTAA
|
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| Protein sequence | MANSPQAKKR ARQNEKRFAI NKARRSRIRT FLRKVEEAIA SGDKEAATAA LRAAQPELMR
GVTRGVYHKN TASRKISRLA ARVKALG
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