| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3028 |
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| Symbol | |
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| ID | 4076601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3197265 |
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| End bp | 3198017 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638008357 |
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| Product | demethylmenaquinone methyltransferase / 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase |
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| Protein accession | YP_615022 |
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| Protein GI | 99082868 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.57312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.365128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGA AATCTGACAG CACCACCCAT TTCGGCTTTG AAACCGTGCC AGAGCACGAA
AAGGCAGGCC GCGTGCAGGG GGTCTTCAAC TCCGTTGCCT CGAAATACGA CATCATGAAC
GATGTTATGA GCGTCGGCAT CCACCGGATC TGGAAAGATG CGATGATGGA CTGGCTCGCC
CCGCGCCCCG GTCAGCGCCT TCTCGATGTT GCAGGTGGTA CTGGTGACAT CTCCTTTCGG
TTCCTGAAAC GCGCAGGCCA TGGCCATTCG ACGGTGCTCG ATCTCACCAC TCCGATGCTC
GAGGAAGGGC GCAAACGTGC CGAAGCAGAG CAGATGGCCG AGTGCCTAGA TTGGGTGACG
GGCGATGCAA TGGCGCTGCC GTTCAAAGAC AACACCTTTG ATGTTTACAC AATTTCTTTT
GGTATTCGAA ATGTGACCCG TCCCCAAGAA GCGCTGAACG AAGCGTACCG CGTCTTGAAG
CCAGGCGGTC GCCTTATGGT GCTGGAGTTC AGCCAGCTTC CCAATGACGG ACTGCAAAAA
CTTTACGATC TCTATAGTTT CAATGTGATC CCCCGCATGG GGCAGATGAT TGCAGGCGAT
TATGACAGCT ATCAATATCT GGTTGAATCG ATCCGCAACT TCCCAGACCA GGAAACCTTC
CTCGGGATGG TAAAGAGTGC CGGGTTCGAG AATGCCAAAC ATCGCAATCT GTCGATGGGC
ATCGCCGCCC TGCATTCAGG CTGGAAGATC TGA
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| Protein sequence | MTEKSDSTTH FGFETVPEHE KAGRVQGVFN SVASKYDIMN DVMSVGIHRI WKDAMMDWLA
PRPGQRLLDV AGGTGDISFR FLKRAGHGHS TVLDLTTPML EEGRKRAEAE QMAECLDWVT
GDAMALPFKD NTFDVYTISF GIRNVTRPQE ALNEAYRVLK PGGRLMVLEF SQLPNDGLQK
LYDLYSFNVI PRMGQMIAGD YDSYQYLVES IRNFPDQETF LGMVKSAGFE NAKHRNLSMG
IAALHSGWKI
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