| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3024 |
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| Symbol | |
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| ID | 4076597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3192426 |
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| End bp | 3193610 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008353 |
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| Product | 2-amino-3-ketobutyrate coenzyme A ligase |
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| Protein accession | YP_615018 |
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| Protein GI | 99082864 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
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| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.299571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.986535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAATG CTTTTCTCAG CCACATCAGC GAAACCCTGA CGCAGATCGA AGCCGATGGT
CTCTACAAGC GCGAGCGAAT GATCACCTCG CCTCAGGGCG GCGAGATCCG GGTTGGGGAC
CGCGAAGTTA TCAATCTTTG TGCCAATAAC TATCTTGGGC TGGCCGACCA TCCCGATTTG
ATCGCCGCCG CAAAATCCGT GATGGACGAA AAAGGTTATG GTATGGCCTC TGTGCGCTTC
ATCTGCGGGA CACAGGATCT GCATCGAACG CTGGAGCAGA AGATAGCAAA TTTTCTCGGC
AAGGACGATT CGATCCTCTT TGCAGCCTGT TTTGACGCCA ATGGCGGGTT GTTCGAGCCG
TTGCTCGGCC CTGAAGATGC GATCATTTCC GACAGCCTGA ACCACGCCTC GATCATCGAC
GGCATCCGTC TTTGCAAGGC ACAGCGCTAT CGCTATGCCA ATAATGACAT GGAGGATCTC
GAGGCGAAGT TGAAGGACGC GCGTGCCAAG GGCGTGCGCC ACATCATGAT CGCAACCGAT
GGGGTTTTCT CCATGGATGG CTACCTCGCC AATCTGCCTG CGATCCGGGA GATTGCCGAT
CGGCATGACG CGATGGTGAT GGTAGATGAC TGTCATGCAA CCGGCTTCAT GGGGCCAAAA
GGGGCAGGTA CGCCGGATCA CTTCGGCGTG GACGTCGATA TCCTGACCGG CACGCTGGGC
AAGGCGCTGG GCGGTGCGAT TGGAGGCTAC ATCGCCGGCC CCCAGCCCGT GATCGATCTG
CTGCGCCAAC GGGCGCGCCC CTATTTGTTC TCAAACTCCC TACCGCCCGC GGTGGTGGCT
GCCGGGCTGG AGGCGATCCG CCTGGTCGAG GAAGGCGAGA GCCTGCGCCG ACAACTGTTT
GAAAACGCCA CGATCTGGCG CGAAGGGCTA ACCCGTCTGG GTTTTGACCT GCTGCCCGGA
GAGCACCCGA TCATCCCGGT GATGCTGGGC GATGCCAAGC TGGCACAGGA AATGGCCAAT
AAATTGTTTG AAGAGGGCGT CTATGTCTCC GGCTTTTTCT TTCCCGTTGT GCCAAAAGGA
CAAGCCCGCA TCCGCACCCA GATGAACGCC GCCCTGACCC AAGACGAGTT GAACCGAGCC
CTGAACGCGT TTGAGCGTGC GGGCAAGGCC TGTGGAGTGA TCTGA
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| Protein sequence | MSNAFLSHIS ETLTQIEADG LYKRERMITS PQGGEIRVGD REVINLCANN YLGLADHPDL
IAAAKSVMDE KGYGMASVRF ICGTQDLHRT LEQKIANFLG KDDSILFAAC FDANGGLFEP
LLGPEDAIIS DSLNHASIID GIRLCKAQRY RYANNDMEDL EAKLKDARAK GVRHIMIATD
GVFSMDGYLA NLPAIREIAD RHDAMVMVDD CHATGFMGPK GAGTPDHFGV DVDILTGTLG
KALGGAIGGY IAGPQPVIDL LRQRARPYLF SNSLPPAVVA AGLEAIRLVE EGESLRRQLF
ENATIWREGL TRLGFDLLPG EHPIIPVMLG DAKLAQEMAN KLFEEGVYVS GFFFPVVPKG
QARIRTQMNA ALTQDELNRA LNAFERAGKA CGVI
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