Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3019 |
Symbol | |
ID | 4076592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 3186312 |
End bp | 3187187 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638008348 |
Product | phosphoserine phosphatase |
Protein accession | YP_615013 |
Protein GI | 99082859 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.426286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGTCG CAACCCTGCT CGTGAACCCT GCCACCCCAA CGCTGGAACC TGCGCTGGTC GAATCGCTGA GGAACGCGTG GGGCGGCGGA GAAGCCAATT GGCTCAATCC CGGCATCGCG GCAGAGTTCA CGCTTAACGC CCTGCCCGAC AACCAGTGGG ACGTCTGGAG TGATCTGCAA GGCATGGGGG TCGATCTGGT GCTTCAGCCC GCAGAAGGGC GGCGCAAAAA GATGCTCTTG GCAGATATGG ATTCAACCAT GATCCAGCAG GAATGCATTG ACGAACTGGC AGATGAGGCC GGCGTTGGTG CCCGCGTCAA GGACATCACG GCCCGTGCCA TGAATGGCGA ACTGGATTTT GAGGGCGCTC TGACCGAGCG GGTCGGGCTT TTGAAGGGAC TGCCCGAGGA GGTCATCGCC CAAGTTCTTG ATACGCGCAT CACCTTGATG CCGGGGGGTG CTGCGCTCTT GGCAACCATG AAGGCACATG GCGCCTACGC GGCGTTGGTT TCGGGCGGCT TCACCGCCTT CACCGCCCGT GTTGCTGGTG AGCTCGGGTT TGACGAGAAC CGCGCCAATA CGCTGATCGT CGAGGACGGC AAACTGACCG GTGACGTCGC GCGTCCCATT CTCGGTCGCG AGGCCAAAGT CGAGGCACTT GAAGAGATCA CCGCCCGCCT TGGCATCTCC GAAGCAGAGG TCATCGCAGT CGGCGACGGG GCGAATGACC TTGGCATGCT GACCCGCGCC GGTGCCGGTG TGGCGCTTCA TGCCAAACCC TCTGTTGCCG CAGAGTGTGA CATCCGCATC AATCACGGCG ACCTCTCGGC ACTCTTGTAC GTACAGGGCT ACAGCCTGGA CGACTTCAAA GGATAA
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Protein sequence | MYVATLLVNP ATPTLEPALV ESLRNAWGGG EANWLNPGIA AEFTLNALPD NQWDVWSDLQ GMGVDLVLQP AEGRRKKMLL ADMDSTMIQQ ECIDELADEA GVGARVKDIT ARAMNGELDF EGALTERVGL LKGLPEEVIA QVLDTRITLM PGGAALLATM KAHGAYAALV SGGFTAFTAR VAGELGFDEN RANTLIVEDG KLTGDVARPI LGREAKVEAL EEITARLGIS EAEVIAVGDG ANDLGMLTRA GAGVALHAKP SVAAECDIRI NHGDLSALLY VQGYSLDDFK G
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