Gene TM1040_3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3019 
Symbol 
ID4076592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp3186312 
End bp3187187 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content61% 
IMG OID638008348 
Productphosphoserine phosphatase 
Protein accessionYP_615013 
Protein GI99082859 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.426286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGTCG CAACCCTGCT CGTGAACCCT GCCACCCCAA CGCTGGAACC TGCGCTGGTC 
GAATCGCTGA GGAACGCGTG GGGCGGCGGA GAAGCCAATT GGCTCAATCC CGGCATCGCG
GCAGAGTTCA CGCTTAACGC CCTGCCCGAC AACCAGTGGG ACGTCTGGAG TGATCTGCAA
GGCATGGGGG TCGATCTGGT GCTTCAGCCC GCAGAAGGGC GGCGCAAAAA GATGCTCTTG
GCAGATATGG ATTCAACCAT GATCCAGCAG GAATGCATTG ACGAACTGGC AGATGAGGCC
GGCGTTGGTG CCCGCGTCAA GGACATCACG GCCCGTGCCA TGAATGGCGA ACTGGATTTT
GAGGGCGCTC TGACCGAGCG GGTCGGGCTT TTGAAGGGAC TGCCCGAGGA GGTCATCGCC
CAAGTTCTTG ATACGCGCAT CACCTTGATG CCGGGGGGTG CTGCGCTCTT GGCAACCATG
AAGGCACATG GCGCCTACGC GGCGTTGGTT TCGGGCGGCT TCACCGCCTT CACCGCCCGT
GTTGCTGGTG AGCTCGGGTT TGACGAGAAC CGCGCCAATA CGCTGATCGT CGAGGACGGC
AAACTGACCG GTGACGTCGC GCGTCCCATT CTCGGTCGCG AGGCCAAAGT CGAGGCACTT
GAAGAGATCA CCGCCCGCCT TGGCATCTCC GAAGCAGAGG TCATCGCAGT CGGCGACGGG
GCGAATGACC TTGGCATGCT GACCCGCGCC GGTGCCGGTG TGGCGCTTCA TGCCAAACCC
TCTGTTGCCG CAGAGTGTGA CATCCGCATC AATCACGGCG ACCTCTCGGC ACTCTTGTAC
GTACAGGGCT ACAGCCTGGA CGACTTCAAA GGATAA
 
Protein sequence
MYVATLLVNP ATPTLEPALV ESLRNAWGGG EANWLNPGIA AEFTLNALPD NQWDVWSDLQ 
GMGVDLVLQP AEGRRKKMLL ADMDSTMIQQ ECIDELADEA GVGARVKDIT ARAMNGELDF
EGALTERVGL LKGLPEEVIA QVLDTRITLM PGGAALLATM KAHGAYAALV SGGFTAFTAR
VAGELGFDEN RANTLIVEDG KLTGDVARPI LGREAKVEAL EEITARLGIS EAEVIAVGDG
ANDLGMLTRA GAGVALHAKP SVAAECDIRI NHGDLSALLY VQGYSLDDFK G