| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3015 |
|---|
| Symbol | |
|---|
| ID | 4076588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 3183354 |
|---|
| End bp | 3183902 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638008344 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_615009 |
|---|
| Protein GI | 99082855 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.407663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAGGCGG GACATATGGC ATTGAAACTC CGTCGTTTGG CAGGCGCGCT ATTGCTGGCC
GGTATGGCGA CCTCAGCAAG CGCGCAGCAG GCAACGACAG ATAACCGCGT AGGTGCGCAT
GTGGATTGGA GCGTCTTTGA GGAGACCTCG CCGCGAGAGT GCATTGGCGT CTCGGCGCCC
AAGGAAACCG TGAACACCCG GGACGGTCGC GTGGTCGCCG TTCGCCGCAG TGAAATTCGC
CTGTTTGTGT TCTACCGCCC GGACAGCGGA AACAAAGGTC AGGTTACATT CACAGGGGGA
TATCCCTTTG CGCCCGGCTC GACCGTGAAC ATGAAAATCG GTGACTCGGA GTTCGAACTC
TTTACCGAAG GCGAATGGGC CTGGCCTGCC ACGCCAACCG ATGACACCAA GATCATCACC
GCCATGAAGC GCGGTGCGGA CGCGGTGCTG ACTGCTCGAT CCTCGCGCGG AACGCAGACC
AAGGACACGT TTTCCCTGCT GGGCTTTACG GCCGCGATCG AAGACGCCGA GAAACGCTGC
GCCGGTTGA
|
|---|
| Protein sequence | MEAGHMALKL RRLAGALLLA GMATSASAQQ ATTDNRVGAH VDWSVFEETS PRECIGVSAP
KETVNTRDGR VVAVRRSEIR LFVFYRPDSG NKGQVTFTGG YPFAPGSTVN MKIGDSEFEL
FTEGEWAWPA TPTDDTKIIT AMKRGADAVL TARSSRGTQT KDTFSLLGFT AAIEDAEKRC
AG
|
|---|
| |