| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3012 |
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| Symbol | |
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| ID | 4076585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3180522 |
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| End bp | 3181370 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008341 |
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| Product | hypothetical protein |
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| Protein accession | YP_615006 |
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| Protein GI | 99082852 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
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| TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.290365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG ACCGTAAGAG CCGCTTTCCC GATGCCCGCG CTGATCGATA CCGCGCCGAA
CATGTTCCCG TGACGCCACA AACGCAGTCG CCTGTCTACC AGCTTGCTTT TGCCGATGAA
GGGTTTCTGT GCCGAGAAGA ACTGCGTCCG GTGCGCTTGC AGCTGGAGCT TCTGAAGCCG
CAGCTGATGC TGGACGAAAA AGGCGTCGAG AGCACGGTCG TGATGTTTGG CGGGGCGCGC
ATCCCCGCCC CGCGTGACAA GGACAAGGCG CGGACACAGA CCCTGGCCGA CCTTAGTCAT
TTCTACGACG AAGCGCGTAC GTTCGCGCAG AAGATGACCG AAAAATCCAA GGCAAGTGGC
GGTCGGCGTC ATGTCGTCGT GACCGGTGGC GGTCCCGGTG TCATGGAAGC TGGAAACCGG
GGCGCCGTGG ATGCGGGCGG CGAGTCGATT GGCCTCAATA TCGTGTTGCC GCACGAACAG
GCGCCCAACG AATACGTCAC GCCGGAGCTC TGTTTCAATT TCCACTATTT TGCGATCCGC
AAGATGCATT TCCTGATGCG TGCTGAGGCG ATTTGCGTTT TCCCTGGTGG CTTTGGCACC
CTTGATGAGC TGTTTGAGGC CCTGACGCTG ATCCAGACCG GGCGCATGGA ACCTGTCCCA
TTCTTGCTGT TTGGCCGCAG TTTCTGGGAG AAGATCATCA ATTGGGAGGC CCTGGCCGAC
GCGGGAACAA TTTCAGACCA GGACCTTGAT CTGTTCAAGT TCGTGGAAAG CGCGGATGAG
GCAATCGCAG CGATCGAGGC GTGGAACCCT GTACCTGCGC GTCAAAACCT GCCCGGTCGT
GATCGTTAG
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| Protein sequence | MSDDRKSRFP DARADRYRAE HVPVTPQTQS PVYQLAFADE GFLCREELRP VRLQLELLKP
QLMLDEKGVE STVVMFGGAR IPAPRDKDKA RTQTLADLSH FYDEARTFAQ KMTEKSKASG
GRRHVVVTGG GPGVMEAGNR GAVDAGGESI GLNIVLPHEQ APNEYVTPEL CFNFHYFAIR
KMHFLMRAEA ICVFPGGFGT LDELFEALTL IQTGRMEPVP FLLFGRSFWE KIINWEALAD
AGTISDQDLD LFKFVESADE AIAAIEAWNP VPARQNLPGR DR
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