| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3003 |
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| Symbol | |
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| ID | 4078033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3170563 |
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| End bp | 3171927 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638008332 |
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| Product | N-formimino-L-glutamate deiminase |
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| Protein accession | YP_614997 |
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| Protein GI | 99082843 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | [TIGR02022] formiminoglutamate deiminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.54016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.775669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACAA TTTTTGCCGC CACCGCGTGT TTGCCTGAGG GCTGGGCGAA GGATGTCCGC
CTCACCATCA AGGACGGCCA AATCTCTCGG ATCGAGACCG GCTCAGCGCC CGTGCCCGGC
GACACGCGCG TCGATGTGCT CTTGCCAGCG CTTGCCAACC TGCATTCACA TTCGTTCCAG
CGCGCGATGG CGGGCCGCAC CGAATTTCGG GGGGCCGGTC AAGACAGTTT CTGGACCTGG
CGAGAGCTGA TGTATCGCTT TCTCGACCAT CTCACCCCCG ATCAATACGA GGCCATTGCG
GCACTTACAT TCATGGAAAT GATGGAGGCC GGGTATGCCT CTGTGGGTGA GTTCCACTAT
GTTCACCATC AGCCGGGCGG TACCGCCTAC CAGAGCCTCA GCGAACTCAG TCAACGCGTG
ATGGCCGGCG CCCAGCAAAC CGGCATTGGC CTCACCCATC TGCCGGTGCT CTACACCTAC
GGAGGCGCAC AACAGCAACC ACTTACCGGT GGCCAGATGC GCTTTGGCAA TGATGTGGAG
CGCTTCTCGC GTCTTGTCAC CGAAGCCCGC GATGCGGCGC AAGAGCTTGG GCGCGACACG
CGTGTCGGTA TCGCGCCGCA TTCCCTGCGC GCCACCAGCC CCGAGGACCT CGCCGCCGTA
TTGCCGCTCG CCGCGGACAG CCCCATCCAC ATCCATATCG CCGAACAGCC CCGCGAAGTG
GCCGAGATCA AGGTCTGGCT GGGAGCGCGC CCCGTAGAGT GGCTGCTCGG GAACGCCCCC
GTAGACAATC AATGGTGCCT GATCCACGCC ACCCACATGA CCGAGACCGA AACCCGGCAC
ATGGCCCATT CCGGCGCGGT TGCCGGGCTT TGCCCCATCA CCGAGGCAAA CCTCGGAGAT
GGCCCGTTTA ACGGCGCGCA CTATCTGCGC GAGGGAGGAC GCTTTGGTGT GGGATCGGAC
TCAAATGTAC GGATCTCCCT CGTTGAAGAG CTGCGCACGC TGGAATACTC CCAACGCCTT
CGGGATCTCG CCCGCAACGT TCTGGTCCCG GCAGAGGGAT CTGTCGGTGA AACCCTCTAC
CTTGGCGCGG CAAGAGGGGG TGCGCAGGCT TTGGGCCGCG ATGCCGGTCG GCTCGAGATT
GGCGCCCTTG CTGATCTGGT GGCGATTGAT TGCGCACGTC CTGCTCTTTT TGGGCTTCCA
GAGCATCAAA TCCTGGATGG GCTGTGTTTT GCAGCGGATG ATCATAGCGT CACCGACGTC
TGGGCCGCAG GGCGTCATAT GGTACAAACA GGTCGTCACA TCGCGCGAGA CAGCATTCTT
GCCAGCTATC GCAAGGCGAT CACGTCTCTT TTGGCGGAAC TCTAA
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| Protein sequence | MQTIFAATAC LPEGWAKDVR LTIKDGQISR IETGSAPVPG DTRVDVLLPA LANLHSHSFQ
RAMAGRTEFR GAGQDSFWTW RELMYRFLDH LTPDQYEAIA ALTFMEMMEA GYASVGEFHY
VHHQPGGTAY QSLSELSQRV MAGAQQTGIG LTHLPVLYTY GGAQQQPLTG GQMRFGNDVE
RFSRLVTEAR DAAQELGRDT RVGIAPHSLR ATSPEDLAAV LPLAADSPIH IHIAEQPREV
AEIKVWLGAR PVEWLLGNAP VDNQWCLIHA THMTETETRH MAHSGAVAGL CPITEANLGD
GPFNGAHYLR EGGRFGVGSD SNVRISLVEE LRTLEYSQRL RDLARNVLVP AEGSVGETLY
LGAARGGAQA LGRDAGRLEI GALADLVAID CARPALFGLP EHQILDGLCF AADDHSVTDV
WAAGRHMVQT GRHIARDSIL ASYRKAITSL LAEL
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