| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2982 |
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| Symbol | |
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| ID | 4078012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3146254 |
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| End bp | 3147135 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638008311 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_614976 |
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| Protein GI | 99082822 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.12997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.783486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGTT TTTTCCTGAT CGCCGTCCCC TATGCATGGC TTTTGGCCCT GTTTTTGGTG
CCGTTCCTGA TCGTCCTCAA AATCTCGCTG TCGGATGCAG CCATCGCTCG CCCGCCCTAT
TTTCCGCAGT TTGACTGGGC AGAGGGGATC CGCGCATTCC TTGCTGAGCT CGATTTTGAG
AATTTCACCT GGCTTCTCGA AGACGATCTC TACTGGAAAG CCTACCTGAG CAGCCTTCAG
ATTGCACTCA CCTCAACGCT CTTGACCCTG ATCGTCGGCT ACCCAATTGC CTATGGCATG
GCCCGCGCGC CCGAGGAATG GCGCCCGACG TTGATGATGC TGGTGATCTT GCCGTTCTGG
ACCTCTTTCC TGATCCGCGT CTACGCTTGG AAGGGCATTC TGTCGAACGA GGGATTTCTC
AACCAGTTCC TGATGTGGAC CGGACTTGTG TCAGAGCCAC TCCAGATCCT GAATACCACA
ACCGCCGTCT ACATCGGCAT CGTCTACACC TACCTGCCAT TCATGATTCT CCCGATTTAC
GCCGCGCTCG AGAGAATGGA CGACAGCCTA ATCGAAGCTG CAGAAGATCT GGGTTGTTCG
CGCCTCTCGG CCTTTTGGCT CGTGACGATT CCCCTATCCA AAGGCGGCAT CATCGCAGGC
TGCTTCCTCG TCTTTATCCC GGCGATGGGC GAGTTCGTGA TCCCGTCCCT GCTGGGCGGA
TCTGACACGC TGATGATCGG TAAAGTGCTC TGGGAGGAGT TCTTCTCCAA CCGGGATTGG
CCGGTGGCGA GCGCAGTGGC GGTTATCTTG TTGCTGATTC TCGTGGTGCC GATCGTGCTG
TTCCAGCGCA ACCAGCAAAA AGAGCAGGAG GGTGACACAT GA
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| Protein sequence | MRRFFLIAVP YAWLLALFLV PFLIVLKISL SDAAIARPPY FPQFDWAEGI RAFLAELDFE
NFTWLLEDDL YWKAYLSSLQ IALTSTLLTL IVGYPIAYGM ARAPEEWRPT LMMLVILPFW
TSFLIRVYAW KGILSNEGFL NQFLMWTGLV SEPLQILNTT TAVYIGIVYT YLPFMILPIY
AALERMDDSL IEAAEDLGCS RLSAFWLVTI PLSKGGIIAG CFLVFIPAMG EFVIPSLLGG
SDTLMIGKVL WEEFFSNRDW PVASAVAVIL LLILVVPIVL FQRNQQKEQE GDT
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