| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2971 |
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| Symbol | |
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| ID | 4078001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3136295 |
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| End bp | 3138247 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638008300 |
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| Product | hypothetical protein |
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| Protein accession | YP_614965 |
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| Protein GI | 99082811 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.123475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTTA CACCGCTTAT TCCATCATCT GGGGTTGCGG GCTGGAATTT TCTGCAATCG
ACCTATGACC GGCAATACGA TGCGTTTGTC CAGTCCGGGA AGTTGAAGAA TGACAGTGAG
TACTTCGCCG AGAATATCGG CGAAGTCACG TCCAGCGAAG ACTTGCTTAA TGACCGCCGC
CTGCTTCAGG TGGCGGTTAA GGCGTTTGGT CTGGAAGAGG AAATCAACTA CCGGGCCTTG
CTGCAGCGTG CGCTCAACGA AGGCACCTCT GCCAGCGATG CGCTTGCCAA CACAATGAAT
GACGAGCGCT ACGTCGAATT CTCCAACGCC TTTGGATTCG GCCCGGGTCA ATCACCGATG
ACCAGCGACA GCAAAGCAAT GCAAGCGGTG ATCGACAAGT TCCAGTCTGC CTCCTTCGAG
GAAGCGGTGG GAGAAGTCGA TGAAACGATG CGCACCGCGC TCTTTGCCAA ACGGGCCATG
ATCGAGGTCT TTGGCGAGCC GGACGAGGAT GACGTATCGC AGCTGAGCGT GAGAGAACGC
GCCCTTCGCG AGTTTGACCT CGCCATGAAG GAGATCAACG GCAAAGACGA TGATGTCCCT
GGTGTGACCT CTGTCGAGGA CCAGTGGGAA GATATTATCG AGCGCGACAC GCTTCGAGAA
TTCTTTGATA CCACGCTCAG AATCTCTGCA GGTGCCGCTG GACTTGAAGA CGACGAACGC
ATCCAGCTTT ATCGAGAACG TGCGCAGATT ATCTTTGGAA CCGACGATCC AACGGTCTTC
TTCTCGGCCG AGAACAAAGA CACAATCATT TCCGCCTTTA AAACCCGTGC AACCGTGAAC
GGGGATGATG CAGCTGAAAC CGCAAAGACT GCGGAACTGT CAGAACACAT CCTGGATCAG
ATGATCTCTC GCGATGCCGC GCTGAATGAA GAATGGGATT TCATCTCCCG GCAGGAACCC
CTGGCGGAGT TTATGAAAAC CGCTCTGGAA TTGCCTGACG ATATCGCGAC ACGAGAGACC
AGCGAAGCCA TGCGGATCTA TCGTGAAAAA GCCATTGAAG CCTTTGGCAC AGATGACCCC
AATGTCTTTG CTAGTGCAGC AAACTTGGAT GCAACACTCG AAGTTTATCG GGAAAATGCC
ACGAACGCTG GTCTCTCCAG TAGCGAAATC TCTTCCAATC TGCGCACGGC TGAGACCATC
CTAAAATTCT CCTACAATCA GGGGGATGCG ATCGATGGTG GTGATGCGGA TGCCGCGGCA
ACCGCGGAAA TAGATGCCGG GTGGTACAGT GTCATGGGTC AAACCGGCGT CCCGCGCTTC
TTGAACACGG CCCTTGATGT GTCCTCTGCG CTTGCGCCGG GTGAAATCTT TTCGGACCTG
ACGATCGACG AGCAGCTAAC AATCTACAAA GATAAAGCGG TTGAACTGTT TGGGACCGCT
GACCTCAAAG AGCTGACCGG CCCGTATCAA ATCGGCGCAG TGAACGATGC CTATCGCACC
AACGCGGAAG CTGCGGGTGA GAGCGAATTC TTCATTACCT ATTATTCCGA TATCGCCGAG
CGAGAACTAA ACACCTTGTT CCAGAGCGAC GATACCGATG CTGAAAAAGC GTTTGAAGAA
GCTCTCGAAG AACTGCGCAC GATGAATGAT GAAGACAATG GTCCAAGCGC CAATTCGCAG
TGGTTCACGA TCATGGGCCA GCAGGCGATG ACCGACTTCA TGCAAGTCGC GTTGGGCCTG
CCCAAAGAGG TTGGTCAAAT GGATATTGAC CAGGCTGTCG AGGTCTACAA GCGCAAGGCA
CAACAAGTTC TGGGGACCGA CAAACCCTCG GAATTCATCT CTGGCGACAA GATGGATGAG
CTGGTCAACA TGTATCTCAC CCGCTCGCAG ATGAACAATC TCAGCAGCGG ATATAGCTCC
GGCAGCGCCG CCCTCATGAT GCTGCGCGGC TAA
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| Protein sequence | MTFTPLIPSS GVAGWNFLQS TYDRQYDAFV QSGKLKNDSE YFAENIGEVT SSEDLLNDRR
LLQVAVKAFG LEEEINYRAL LQRALNEGTS ASDALANTMN DERYVEFSNA FGFGPGQSPM
TSDSKAMQAV IDKFQSASFE EAVGEVDETM RTALFAKRAM IEVFGEPDED DVSQLSVRER
ALREFDLAMK EINGKDDDVP GVTSVEDQWE DIIERDTLRE FFDTTLRISA GAAGLEDDER
IQLYRERAQI IFGTDDPTVF FSAENKDTII SAFKTRATVN GDDAAETAKT AELSEHILDQ
MISRDAALNE EWDFISRQEP LAEFMKTALE LPDDIATRET SEAMRIYREK AIEAFGTDDP
NVFASAANLD ATLEVYRENA TNAGLSSSEI SSNLRTAETI LKFSYNQGDA IDGGDADAAA
TAEIDAGWYS VMGQTGVPRF LNTALDVSSA LAPGEIFSDL TIDEQLTIYK DKAVELFGTA
DLKELTGPYQ IGAVNDAYRT NAEAAGESEF FITYYSDIAE RELNTLFQSD DTDAEKAFEE
ALEELRTMND EDNGPSANSQ WFTIMGQQAM TDFMQVALGL PKEVGQMDID QAVEVYKRKA
QQVLGTDKPS EFISGDKMDE LVNMYLTRSQ MNNLSSGYSS GSAALMMLRG
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