| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2968 |
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| Symbol | |
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| ID | 4077998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3134061 |
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| End bp | 3134855 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008297 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_614962 |
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| Protein GI | 99082808 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.166186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAA ACTACAACCA GCGGCTGGCC TGTGCCTTGG CCGGGATTGA TCCGCGTGTC
TATAGGCGAC GACCATCCAG ACCGGAGGAG ACAGAACTCC GAGAGAGGCT GAAGGAACTG
TCCGGGGAAC GTCGGCGCTT GGGCTATCGG CGGCTGCACC GCCTGCTGGG GCGAGAGGGC
TGGCAGGTGA ATTGGAAGAA GATTTACCGG ATTTACCGCG AAGAAGGCCT GACAGTGCGT
AAGCGTGGTG GTCGCAAAGT AGCGATTGGA ACGCGCGCGC CCATGTCGAT CCCGCAGGGG
CCGAACCACC GATGGTCCTT GGACTTTGTC TCAGACAGCC TTTCAGATGG GCGCCGGTTC
CGTGTCCTGT GCGTCATCGA TGACTTCAGC AGGGAATGCC TGGCCTGCGT GGTCGACACC
TCGCTGTCAG GGCAGCGCGT GGGACGAGAA CTTGATAGCA CTGTCCGAAC GCGTGGTTAT
CCCTGCATCG TGATCAGCGA CAACGGAACG GAACTGACTT CGAGCGCCAT TCTGAGATGG
CAGGAGGATC GAAAGGTCGA GTGGCACTAC ATTGCGCTTG GAAAGCATAT GCAGAACGGC
TTTGTGGAAA GCTTCAACGG CCGCCTACGG GACGAGTGTC TTAACGAGCA CCTGTTTGCC
AACCTGCGCC ATGCCAGAGG ACTGATCTCG GCTTGGCACA CCGACTACAA TCACCACCGC
CCCTACATGA GCATCGACGG GCTCACCCCG CGGGAGTATC ATCAACGGTC AGTAAAGGAC
CAAACCCTGA TGTGA
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| Protein sequence | MPKNYNQRLA CALAGIDPRV YRRRPSRPEE TELRERLKEL SGERRRLGYR RLHRLLGREG
WQVNWKKIYR IYREEGLTVR KRGGRKVAIG TRAPMSIPQG PNHRWSLDFV SDSLSDGRRF
RVLCVIDDFS RECLACVVDT SLSGQRVGRE LDSTVRTRGY PCIVISDNGT ELTSSAILRW
QEDRKVEWHY IALGKHMQNG FVESFNGRLR DECLNEHLFA NLRHARGLIS AWHTDYNHHR
PYMSIDGLTP REYHQRSVKD QTLM
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