Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2964 |
Symbol | flgC |
ID | 4077115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 3131343 |
End bp | 3131735 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638008293 |
Product | flagellar basal body rod protein FlgC |
Protein accession | YP_614958 |
Protein GI | 99082804 |
COG category | [N] Cell motility |
COG ID | [COG1558] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR01395] flagellar basal-body rod protein FlgC [TIGR01396] flagellar basal-body rod protein FlgB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.796607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.243642 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGACT TTTCCAAATC CCTCTCCGTT ACAGCGAGTG GCCTGCGCGC GCAGGCGGCG CGACTTACCC ATGTATCGGA GAACATTTCC AACGCGGACA CTCCGGGGTA TCGCCGTAAA ACGGTGTCCT TCCAGTCCGT GCGTGATCTG GAAACCGATG TGAGCCAAGT CAGAGTTGGT CGGGTGTCAC TCGACCGCAC CGAACTGGAG CAAGTTTACG ATCCCTCCCA CCCTTTGGCC GATGAAACCG GTCACTACGA GGGATCGAAT GTCGATCTGA TGATCGAAAT CGCGGACGCG CGCGAAGCGC AGCGTACCTA TGAGGCCAAC CTGAAAATGT TCGATCAGAC GCGACAAATG TCGTCGTCCC TGATGGATCT TTTGCGCCGC TAA
|
Protein sequence | MSDFSKSLSV TASGLRAQAA RLTHVSENIS NADTPGYRRK TVSFQSVRDL ETDVSQVRVG RVSLDRTELE QVYDPSHPLA DETGHYEGSN VDLMIEIADA REAQRTYEAN LKMFDQTRQM SSSLMDLLRR
|
| |