Gene TM1040_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2948 
Symbol 
ID4077099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp3117624 
End bp3118148 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content55% 
IMG OID638008277 
Productflagellar basal body-associated protein FliL 
Protein accessionYP_614942 
Protein GI99082788 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.577477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.60889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG CTGTAGCTGA TGTAGAAACG GATCAACCGG CGAAGAAGAG CAAGATGCCC 
CTTATCATAG GGCTCGTACT TGGAATCGCA GGCGCAGGAG GCGGTTTTTA TGCCGTCCAG
TCAGGCCTTC TTCCCTTTGG TAACACACCC GCGCCCGAAA TGGCGCAGGC CACCAAAGAG
GCGCCAGAAG GCGTGGACAA AGGTGAGTCG GCGGAAGAGA TCGCCAATCT CGCCTTTATT
GAAATGGAGC CAATTGTTGT CACACTGAAT AGAGCCAGTG GGGTCCAGCA ACTTCGGTTC
CGAGCGCAAC TTGAGGTCAA TCAAGCCGAT CAGGATGAGG TTGAAACAGT CCTCCCCCGG
GTTGTCGACG TTCTGAACAG CTACCTGCGG GCGCTAGAGC TGGAGGATCT TACCGATCCG
ATGGCACTGC CAAAACTGCG GGCACAGATG CTACGGCGAA TCAATATCGT AACCGGTCAG
GGCCGCGTGC GTGATTTGCT GATCATGGAT TTCGTACTCA ACTAG
 
Protein sequence
MTDAVADVET DQPAKKSKMP LIIGLVLGIA GAGGGFYAVQ SGLLPFGNTP APEMAQATKE 
APEGVDKGES AEEIANLAFI EMEPIVVTLN RASGVQQLRF RAQLEVNQAD QDEVETVLPR
VVDVLNSYLR ALELEDLTDP MALPKLRAQM LRRINIVTGQ GRVRDLLIMD FVLN