Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2948 |
Symbol | |
ID | 4077099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 3117624 |
End bp | 3118148 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638008277 |
Product | flagellar basal body-associated protein FliL |
Protein accession | YP_614942 |
Protein GI | 99082788 |
COG category | [N] Cell motility |
COG ID | [COG1580] Flagellar basal body-associated protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.577477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.60889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGACG CTGTAGCTGA TGTAGAAACG GATCAACCGG CGAAGAAGAG CAAGATGCCC CTTATCATAG GGCTCGTACT TGGAATCGCA GGCGCAGGAG GCGGTTTTTA TGCCGTCCAG TCAGGCCTTC TTCCCTTTGG TAACACACCC GCGCCCGAAA TGGCGCAGGC CACCAAAGAG GCGCCAGAAG GCGTGGACAA AGGTGAGTCG GCGGAAGAGA TCGCCAATCT CGCCTTTATT GAAATGGAGC CAATTGTTGT CACACTGAAT AGAGCCAGTG GGGTCCAGCA ACTTCGGTTC CGAGCGCAAC TTGAGGTCAA TCAAGCCGAT CAGGATGAGG TTGAAACAGT CCTCCCCCGG GTTGTCGACG TTCTGAACAG CTACCTGCGG GCGCTAGAGC TGGAGGATCT TACCGATCCG ATGGCACTGC CAAAACTGCG GGCACAGATG CTACGGCGAA TCAATATCGT AACCGGTCAG GGCCGCGTGC GTGATTTGCT GATCATGGAT TTCGTACTCA ACTAG
|
Protein sequence | MTDAVADVET DQPAKKSKMP LIIGLVLGIA GAGGGFYAVQ SGLLPFGNTP APEMAQATKE APEGVDKGES AEEIANLAFI EMEPIVVTLN RASGVQQLRF RAQLEVNQAD QDEVETVLPR VVDVLNSYLR ALELEDLTDP MALPKLRAQM LRRINIVTGQ GRVRDLLIMD FVLN
|
| |