| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2939 |
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| Symbol | |
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| ID | 4077090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3108809 |
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| End bp | 3110077 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638008268 |
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| Product | hypothetical protein |
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| Protein accession | YP_614933 |
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| Protein GI | 99082779 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1749] Flagellar hook protein FlgE |
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| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.490439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATTT CCTCCTCGCT GAATGCTGGA GTAGCAGGGC TCGCCGCGAA TTCAACTCGT
TTGGCAGCCA TTTCCGATAA CATCGCGAAC TCCTCGACAG CCGGCTACAA GCGTGTTGTG
ACCTCATTTG AATCCATGGT CATTTCCCAA TCCGGCGGCC GCTACGCAGC AGGTGGCGTC
TCCGTCAACA ACACGCGCAT GATTGACGAG CGCAGCTCCC TGATCTCCAC CAGCAACGCC
ACCGATCTCG CCGTTGCAGG CCGTGGCTTC CTCCCGGTCG CAAGCTTGGC CGAAGTGAAG
GCAGGTGAAG ATCCGAACAT GCTTCTGACC ACCTCCGGCT CCTTCCGCAC CAATGACGAA
GGGTATCTGA CAACAAGCTC CGGTCTGGTG CTGCTGGGTT GGCCCGCGAA TTCCGATGGA
ACACTCCCCA GCGTCGCGCG CGACACGGAT GATCCGCTCG AGCCCATCAG ATTTGATACT
GCACAGCTGA GTGCGGCCCC GACCACTGCA GTGAGCCTGG GTGTAAACCT GCCTGCAAGC
AGCGCTGTGA CAGGTGCCGC TGGGGCGGCT GAAGAAAACA CCATCCAATA TTTTGACAAC
CTCGGCGGTC AACAGGATCT GAACATCGTC TACACCCCAA CCGGGGCTGC GGACAACGAG
TGGACCATGA CCCTCACCGA TGGTGTCACA GGCACCGTGG TTGGGGACTA CACGTTGACG
TTTGACGACT CCGTGACGGG CAAAGGGACG CTCTCTACCG TCACGACCAC AACCGGTGGC
GCCTATGATC CTGCGACTGG CGCCATAATA GTCACCACTG ATAGCGGTCC AATAGAGATT
GAAATCGGCG TGATGACGCA GCTTGCCAGC TCTTTCTCTG CCGCGACCAT CGAAAAAGAT
GGCTATGAAG CGGCAAGCTT TGCGGGTGTT GAAGTGGACG AGGGTGGCTA TGTGCATGCG
CTCTATGAAA ACGGCAGCAG TCGCATCGTT TACCAGATCC CGCTTGCGGA TATGCCAAAT
GCCAATGGGA TGCGGTCTCT GGACAGCCAG ACCTTCATGC CCTCCCCTGA CAGTGGTGCG
TACTACCTCT GGGATGCGGG CGCCGGGCCG ACTGGAACAG TGGCCAGCTA CCGTCAGGAG
GAATCCGGCA CCGATGTTGC TTCTGAATTG ACCACGATGA TCCAGACCCA GCGGGCCTAT
TCGTCGAACG CAAAGGTCAT TCAGACTGTG GATGAGATGC TTCAGGAAAC GACCAACATT
AAGCGCTGA
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| Protein sequence | MTISSSLNAG VAGLAANSTR LAAISDNIAN SSTAGYKRVV TSFESMVISQ SGGRYAAGGV
SVNNTRMIDE RSSLISTSNA TDLAVAGRGF LPVASLAEVK AGEDPNMLLT TSGSFRTNDE
GYLTTSSGLV LLGWPANSDG TLPSVARDTD DPLEPIRFDT AQLSAAPTTA VSLGVNLPAS
SAVTGAAGAA EENTIQYFDN LGGQQDLNIV YTPTGAADNE WTMTLTDGVT GTVVGDYTLT
FDDSVTGKGT LSTVTTTTGG AYDPATGAII VTTDSGPIEI EIGVMTQLAS SFSAATIEKD
GYEAASFAGV EVDEGGYVHA LYENGSSRIV YQIPLADMPN ANGMRSLDSQ TFMPSPDSGA
YYLWDAGAGP TGTVASYRQE ESGTDVASEL TTMIQTQRAY SSNAKVIQTV DEMLQETTNI
KR
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