| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2924 |
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| Symbol | |
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| ID | 4078602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3094788 |
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| End bp | 3095492 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008253 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_614918 |
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| Protein GI | 99082764 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.470238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCCA ACAATGATCC ACATCTGCTC ATTGTCGATG ATGACGAGCG CATTCGCGAC
CTTCTGAAGA AGTTCCTGAT CCGCGCCGGA TTTCTGGTGA CTGCCGCCCG GGATGCAGCT
CATGCAAGGC GCGTGCTCTC GGGGTTGGAT TTTGACCTGA TCGTGCTGGA TGTGATGATG
CCCGGCGAGG ACGGGCTCTC GCTCACGGCA GCATTGCGCG AGACAATGGC GACACCGATC
CTGTTGCTGA CCGCACGCGG TGAAACGGAT GACCGGATCA AGGGGTTGGA GGCCGGCGCC
GATGACTATT TGCCCAAACC TTTTGAACCC AAAGAACTCT TGCTGCGCAT CAACGCCATT
CTGCGGCGCA TGCCAGAAAG TCAGCCCGAG GATATTGCGC CGAAGTTCCT GCAACTCGGT
GAGATCAGAT ATGACATCGA CCGCGGCGAG ATGTGGCAGG GTGAGGATCT GATCCGGCTG
ACGTCAACTG AAATCCAGTT GATGAAGATC TTTTCGGCTC AACCGGGCGA AGCTGTCAGC
CGCGCCAAGC TGGTCGAGGA TCTGGGACGT GACCGGGGCC AGGCACAGGA GCGCGCGGTC
GATGTTCAGA TCACCCGCTT GCGGCGCAAG ATTGAACCCA ATCCCAAGCA GCCGCAGTAT
CTTCAGACCG TGCGTGGTGC AGGCTACATG CTGGCGCCGG ACTAA
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| Protein sequence | MSANNDPHLL IVDDDERIRD LLKKFLIRAG FLVTAARDAA HARRVLSGLD FDLIVLDVMM
PGEDGLSLTA ALRETMATPI LLLTARGETD DRIKGLEAGA DDYLPKPFEP KELLLRINAI
LRRMPESQPE DIAPKFLQLG EIRYDIDRGE MWQGEDLIRL TSTEIQLMKI FSAQPGEAVS
RAKLVEDLGR DRGQAQERAV DVQITRLRRK IEPNPKQPQY LQTVRGAGYM LAPD
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