| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2917 |
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| Symbol | |
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| ID | 4078595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3085207 |
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| End bp | 3087894 |
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| Gene Length | 2688 bp |
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| Protein Length | 895 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008246 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_614911 |
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| Protein GI | 99082757 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.972579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGTA TCGGAACTCT CGCCAAAAAG GTCTTCGGAA CACCGAACGA CCGCAAAATC
AAGGCGACAC GGCCGCTGAT TGCAAAGATC AACGCGCTGG AGCCTGAGTT CGAGGCACTG
AGCGACCAGG GCATCAAAGA CAAGACCGAA GACCTGCGCA AACGGGCGCT TGCGGGTGAA
AGCCTTGACG ATCTGTTGCC CGAAGCCTTT GCCAACGTGC GCGAAGCAGC GCGCCGCGCC
CTTGGCCTGC GGGCGTTTGA CACCCAGCTG ATGGGCGGAA CCTTCCTGCA TCAGGGCAAT
ATCTCCGAGA TGAAGACGGG TGAAGGGAAA ACCCTTGTGG CGACCTTCCC AGCTTACCTC
AACGCGCTGA CCGGCAAAGG GGTGCATGTC GTCACGGTGA ACGAATACCT CGCCAAGCGT
GACAGCGAGT GGATGAGCAA GGTCTTTGGT GCTTTGGGCA TGACCACCGG CGTGATCTAC
TCAAACCAGC CCGAGGCGGA GAAAATGGCC GCCTATCAAT GTGACGTGAC CTACGCCACC
AACAATGAGC TTGGCTTTGA TTACCTGCGC GACAACATGA AGCCCTCTCT GGACCAGGTG
TTCCAGAAGC AGCACAACTT TGCGATCGTG GATGAGGTCG ACTCGATCCT GATCGACGAG
GCGCGCACGC CGCTGATCAT TTCCGGCCCG GCCGAGGATC GTTCCGAGCT CTATGAAACC
ATCGACAAGC TGATCCCGAC GCTGGATGAG GGTCACTATG AGATCGACGA GAAAACGCGC
GGTGTGACCT TCACGGACGA GGGCAATGAA TTCCTCGAAG AGTCGCTTCT GAAGGCGGGG
CTGCTGGAAG AAGGGGCGAG CCTTTATGAC CCCGAGAGCA CGACGATTGT TCACCACGTC
AACCAGGCCC TGCGGGCGCA CAAGCTGTTC CAGCGCGACA AGGACTATAT CGTGCGCGAC
GGCAATGTTG TTCTGATCGA CGAATTCACG GGCCGCATGA TGCCCGGTCG CCGTCTCTCC
GAGGGGCTGC ATCAGGCCAT CGAGGCGAAG GAAGGCACAG ATATCCAACC GGAAAACACC
ACGCTGGCGT CGGTGACCTT CCAGAACTAC TTCCGCCTTT ATGACAAGCT CTCTGGCATG
ACCGGCACGG CGATGACCGA AGCTGAAGAA TTTGCCGAGA TCTATGGACT GGGTGTGGTC
GAGGTGCCCA CGAACAGACC GATCGCGCGG ATCGACGAGG ACGACAAGGT CTATCGCACA
GCCAACGAAA AATATGCGGC CATGATCGCG GAGACCAAGC TTGCCCATGA AAAAGGCCAG
CCGGTTCTTC TCGGGACCAC GTCGATTGAG AAATCCGAAC TGCTCAGTCA GCTCCTTCAG
CAGGAAGGCA TCGAACACAA CGTTCTGAAC GCGCGCCACC ACGAGCAAGA AGCCAAGATC
GTTGCCGAGG CGGGCCGTTT GGGCGCAGTG ACCATCGCCA CCAACATGGC GGGGCGCGGC
ACCGACATTC AGCTTGGCGG CAACATTGAT CTGAAGGTGA TGGAGGCGCT TGAGGCCAAC
CCCGACGCCG ACCCGGCTGT TCTGCGTGCT GAGGAAGAAG CCAAACACGC CGAGGAAAAG
CAGAAAGTGC TCGAAGCGGG TGGCCTCTAT GTGATGGCCT CCGAACGCCA CGAAAGCCGC
CGCATCGACA ACCAGCTGCG CGGTCGTTCC GGACGTCAGG GGGACCCGGG CCGCACCAGT
TTCTACCTTA GCCTCGAAGA TGATCTGATG CGCATTTTCG GCTCCGAGCG GTTGGACAAG
CTGTTGTCGG GTCTGGGCAT GAAAGAAGGC GAGGCGATCA TTCACCCGTG GGTGAACAAA
TCGCTTGAGC GCGCGCAGGC CAAGGTCGAA GGCCGTAACT TCGACATGCG CAAGAACGTG
TTGAAGTTCG ACGACGTGAT GAATGATCAG CGTAAAGTGG TCTTTGCGCA GCGCCGCGAG
ATCATGGCCT CTGACGATAC CCATGAGATC GTCACTGACA TGCGCCATGA GGTGATCGAT
GATCTCATCG ATATTTACAT GCCGCCCAAA ACCTATGCCG ACCAATGGGA TACCCAAGGG
TTGCAGGACG ACGTGCGCGA GAAGCTCAAC ATTGATGCTC CTGTGGTCGA ATGGGCCGCA
GAAGAGGGTG TCGACGACGA GCAGATCCGC GAACGTCTGG TAGAGGCCTC CGACAAGCTG
ATGGCCGAGA AGGTCGAAGC CTTTGGTCAG GAAGGCATGA GCAACATCGA AAAGCAGGTG
CTGCTGCAGA CCATCGACGC CAAATGGCGC GAACATCTGC TGACGCTCGA ACATCTGCGC
TCCGTTGTCG GCTTCCGGGG CTACGCCCAG CGTGATCCGC TCAACGAGTA CAAGAACGAG
AGCTTCCAGT TGTTTGAGTC GATGCTGGAT TCCTTGCGCG AGACCGTCAC CCAACAGCTT
TCTCGCGTGC GTCCTCTGAG CGAAGAGGAA CAGCGCGAGA TGATGATGCA GATGGCGGCA
CGTCAGGGCA TGCAGCGCGC GGCTGCGCCT GCCGCCGAGC CTGTCGAAGC GCCCAAAGAA
GGATTTGTCG AGGATGACCC CTCCACCTGG GGCAACCCCT CGCGCAACGA CAAGTGCCCC
TGTGGATCTG GGAAAAAGTT TAAGCATTGC CACGGCCGGC TGGGTTAA
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| Protein sequence | MLGIGTLAKK VFGTPNDRKI KATRPLIAKI NALEPEFEAL SDQGIKDKTE DLRKRALAGE
SLDDLLPEAF ANVREAARRA LGLRAFDTQL MGGTFLHQGN ISEMKTGEGK TLVATFPAYL
NALTGKGVHV VTVNEYLAKR DSEWMSKVFG ALGMTTGVIY SNQPEAEKMA AYQCDVTYAT
NNELGFDYLR DNMKPSLDQV FQKQHNFAIV DEVDSILIDE ARTPLIISGP AEDRSELYET
IDKLIPTLDE GHYEIDEKTR GVTFTDEGNE FLEESLLKAG LLEEGASLYD PESTTIVHHV
NQALRAHKLF QRDKDYIVRD GNVVLIDEFT GRMMPGRRLS EGLHQAIEAK EGTDIQPENT
TLASVTFQNY FRLYDKLSGM TGTAMTEAEE FAEIYGLGVV EVPTNRPIAR IDEDDKVYRT
ANEKYAAMIA ETKLAHEKGQ PVLLGTTSIE KSELLSQLLQ QEGIEHNVLN ARHHEQEAKI
VAEAGRLGAV TIATNMAGRG TDIQLGGNID LKVMEALEAN PDADPAVLRA EEEAKHAEEK
QKVLEAGGLY VMASERHESR RIDNQLRGRS GRQGDPGRTS FYLSLEDDLM RIFGSERLDK
LLSGLGMKEG EAIIHPWVNK SLERAQAKVE GRNFDMRKNV LKFDDVMNDQ RKVVFAQRRE
IMASDDTHEI VTDMRHEVID DLIDIYMPPK TYADQWDTQG LQDDVREKLN IDAPVVEWAA
EEGVDDEQIR ERLVEASDKL MAEKVEAFGQ EGMSNIEKQV LLQTIDAKWR EHLLTLEHLR
SVVGFRGYAQ RDPLNEYKNE SFQLFESMLD SLRETVTQQL SRVRPLSEEE QREMMMQMAA
RQGMQRAAAP AAEPVEAPKE GFVEDDPSTW GNPSRNDKCP CGSGKKFKHC HGRLG
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