| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2910 |
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| Symbol | nusA |
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| ID | 4078588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3077203 |
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| End bp | 3078819 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008239 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_614904 |
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| Protein GI | 99082750 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCA CCTCTGCAAA CCAGCTGGAG CTGTTGCAAA CCGCCGAGGC CGTGGCGCGT
GAGAAAATGA TCGATCCCGG TCTGGTGGTC GAAGCGATGG AAGAATCCCT CGCCCGCGCC
GCCAAGAGCC GCTACGGCAG CGAGATGGAC ATTCGTGTCT CCATTGACCG CAAGACCGGT
AAGGCGACTT TCACTCGTGT GCGCACCGTG GTCGAAGACG AAGAGCTCGA AAACTACCAG
TCCGAGCTGA CCGTCGCGCA GGCCAAGCAG TATATGGAAG ACCCCAAGGT CGGCGACACC
ATCGTTGATG AGGTTCCCCC GGTCGAGATG GGCCGGATCG CGGCACAATC CGCCAAGCAG
GTGATCCTGC AGAAAGTGCG CGAAGCAGAG CGGGATCGTC AGTACGAAGA GTTCAAGGAT
CGCAACGGCA CCATCATCAA TGGCGTCGTC AAGCGAGAGG AATACGGCAA CGTCATCGTC
GATATCGGAT CTGGCGAAGG CATTCTGCGT CGCAACGAGA AAATCGGCCG TGAGAGCTAT
CGCCCGAACG ACCGTATTCG CTGCTTCATC AAGGACGTAC GCCGCGAACC CCGTGGCCCG
CAGATCTTCC TCAGCCGCAC CGCGCCGGAG TTCATGGCCG AGCTCTTCAA GATGGAAGTG
CCTGAAATCT ATGACGGCAT CATCGAGATC AAGGCTGTGG CCCGTGACCC CGGTTCGCGT
GCAAAGATCG CTGTTGTGTC CTATGACGGG TCGATCGATC CGGTTGGCGC CTGTGTCGGT
ATGCGTGGCT CCCGCGTGCA GGCGGTCGTG AACGAACTGC AGGGCGAAAA GATCGACATC
ATCCCTTGGA ACGAAGATCA GCCGACCTTC CTTGTGAACG CGCTGCAGCC CGCAGAGGTC
TCCAAGGTTG TCTTGGACGA AGAAGCCGGC AAGATCGAAG TGGTTGTGCC CGACGAGCAG
CTTTCTCTGG CGATTGGCCG TCGCGGTCAG AACGTACGTC TGGCGTCTCA GCTGACCAAC
CTCGACATCG ACATCATGAC GGAAGAGGAA GAATCCGCAC GCCGTCAGAA GGAATTCGAG
GCGCGCACCG CACTGTTCAT GGAAACGCTC GATCTCGACG AGTTCTTTGC ACAGCTTCTG
GTTTCTGAAG GCTTCACCAA CCTCGAAGAG GTCGCCTATG TCGAACTCGA CGAACTCTTG
GTGATCGATG GCGTCGACGA AGGCACCGCC GAAGAACTGC AGGCCCGCGC GCGCGATTAT
CTCGAAGCCA AGGCCAAGGC CGCGCTCGAC AACGCCCGCA GCATGGGCGT CGAGGACAGC
CTTATTGACT TTGACGGCCT GACACCCCAG ATGGTTGAGG CACTGGCGAA GGATGATGTG
AAATCGCTTG AAGACTTCGC AACCTGTGCG GACTGGGAGC TTGCGGGTGG CTGGACCACC
GTCAACGGCG AGCGTGTCAA GGATGAAGGG ATTCTCGAGC CCTTCGATGT GAGCCTCGAA
GAGGCGCAAA ATCTGGTGAT GACGGCGCGG ATTATGCTCG GCTGGGTCGA CCCGGCAGAA
CTTGAATCCG ATGCTGATGA TCTCGAGGAA GAAGCCGAAG GGGAAGCGGA AGCCTGA
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| Protein sequence | MAITSANQLE LLQTAEAVAR EKMIDPGLVV EAMEESLARA AKSRYGSEMD IRVSIDRKTG
KATFTRVRTV VEDEELENYQ SELTVAQAKQ YMEDPKVGDT IVDEVPPVEM GRIAAQSAKQ
VILQKVREAE RDRQYEEFKD RNGTIINGVV KREEYGNVIV DIGSGEGILR RNEKIGRESY
RPNDRIRCFI KDVRREPRGP QIFLSRTAPE FMAELFKMEV PEIYDGIIEI KAVARDPGSR
AKIAVVSYDG SIDPVGACVG MRGSRVQAVV NELQGEKIDI IPWNEDQPTF LVNALQPAEV
SKVVLDEEAG KIEVVVPDEQ LSLAIGRRGQ NVRLASQLTN LDIDIMTEEE ESARRQKEFE
ARTALFMETL DLDEFFAQLL VSEGFTNLEE VAYVELDELL VIDGVDEGTA EELQARARDY
LEAKAKAALD NARSMGVEDS LIDFDGLTPQ MVEALAKDDV KSLEDFATCA DWELAGGWTT
VNGERVKDEG ILEPFDVSLE EAQNLVMTAR IMLGWVDPAE LESDADDLEE EAEGEAEA
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