| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2902 |
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| Symbol | |
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| ID | 4078580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3071087 |
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| End bp | 3071818 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638008231 |
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| Product | competence protein F, putative |
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| Protein accession | YP_614896 |
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| Protein GI | 99082742 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTGC GGGCACGGAT TCAAACAGCA GTTTCACTCG TCTACCCTGC ACGCTGCCTG
AACTGCGGCG GGCTGGTCGA GAGCGACTTT GGCCTGTGTG GCGCGTGTTG GCGTGACACC
ACCTTTATTT CAGGGCTCGT ATGCGAAGGA TGCGGTGCGC CGCTCCCGGG CGAGGATGAC
GGACAGATGG TTCATTGCGA CGCTTGCCTG CGTGCGCCGG GTGAATGGGA CCGGGGGCGG
GCGGCTCTGG TTTACACGGG ACAGGGTCGC CGGTTGGTGC TGGCACTGAA ACACGGTGAC
CGAACCGACC TGGTGCGCCC TGCGTCTGCG TGGATGGCGC GGGCTGCACG CGTGCTCTTG
AGCCCAAAGC CCCTACTGGT GCCGGTTCCG CTTCATTGGA CGCGGCTGCT GCACCGCCGG
TACAATCAAT CCGCCTTGCT GGCCCAGGCG ATCGCGGCAC GTGAGGAATG CGACTGTTGT
CCCGATGCGC TGATCCGTGT TGCAAAAACG CCCATGCTCG AAGGGTACTC GCGCTCGGAG
CGTCGCGCGC TCCTGAGTGA CGCCATACGT CCCAATCCCC GGATGGCGTC GCGATTAAAG
GGCAGGCGGG TGCTGCTCGT GGATGATGTC ATGACCAGCG GATCGACGCT TTCGGCTTGT
GCGCGCGCCT GTATGGATGC AGGCGCAAAA AGCACAAATG TCGCTGTTCT CGCCCGGGTC
ACGGGCTCGT GA
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| Protein sequence | MTLRARIQTA VSLVYPARCL NCGGLVESDF GLCGACWRDT TFISGLVCEG CGAPLPGEDD
GQMVHCDACL RAPGEWDRGR AALVYTGQGR RLVLALKHGD RTDLVRPASA WMARAARVLL
SPKPLLVPVP LHWTRLLHRR YNQSALLAQA IAAREECDCC PDALIRVAKT PMLEGYSRSE
RRALLSDAIR PNPRMASRLK GRRVLLVDDV MTSGSTLSAC ARACMDAGAK STNVAVLARV
TGS
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