| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2897 |
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| Symbol | |
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| ID | 4078575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3067377 |
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| End bp | 3067907 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638008226 |
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| Product | Allergen V5/Tpx-1 related |
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| Protein accession | YP_614891 |
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| Protein GI | 99082737 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.870748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGCT CTCATCGAAC ACTTTTAGGA TTTAGAATGA CACGCGTATT CCTGATTCTG
GCGACATTGA CGAGCTTTGT CCTTGCGGCA TGTACGACCG GCAACGATGG CAGTGCAACC
GGATCCGGTG TCTACAAGAT TCGCAACGAA GAGCGCACGC AGTTTCGTAT GCTCGATTCG
GTGAACGCAC TGCGCGAAGC TGCAGGAAAC CCGCCGGTAC AACTCGATAG CAAGTTGAAC
GCCGCCGCCG CGACGCATTC GCGAGATATG TCAGTGCAAA ACCGCCCTTG GCACTTTGGC
TCCGATGGCT CGTCACCGCT CGATCGCGTG GCACGCGTTG GCTATGAGGG CACGCTCCTT
GGCGAAAACA TCTCGGAAAC CTACGAGAAC GAAGTTCAAA CCCTTACCGC TTGGATGGAA
GACGGCGGCA CTCGCGCCGT GATCATGGAT CCCAACGCGC GCAATATGGG GTTCTCTTGG
TTCCAAGAGC AAAACGGCAA GATCTGGTGG ACCCTGCTGA TGGCTCAATA A
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| Protein sequence | MGRSHRTLLG FRMTRVFLIL ATLTSFVLAA CTTGNDGSAT GSGVYKIRNE ERTQFRMLDS
VNALREAAGN PPVQLDSKLN AAAATHSRDM SVQNRPWHFG SDGSSPLDRV ARVGYEGTLL
GENISETYEN EVQTLTAWME DGGTRAVIMD PNARNMGFSW FQEQNGKIWW TLLMAQ
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