| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2895 |
|---|
| Symbol | |
|---|
| ID | 4078573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 3065895 |
|---|
| End bp | 3066680 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 638008224 |
|---|
| Product | Ion transport protein |
|---|
| Protein accession | YP_614889 |
|---|
| Protein GI | 99082735 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.248664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGATC GATTGAAATC CGTATTGGAC AGCGATGGAT TCAGCCGCTT CATCACCGCG
GTCATCCTTG TCAACGCGGT GACATTGGGG ATGGAGACCT CCGATACGAT CATGCAGCGC
ATGGGACAGC TGGTTTTGTT GATCGACAAG GTCTGCCTGA TCATCTTTGT GACAGAGATC
GCTGCCAAGC TTTTGGTGCG CCGACACAGG TTCTTTTTGA GCGGCTGGAA CATCTTTGAT
TTCCTGATTG TCGGCGTTGC GCTTGTGCCG GGCGCGCAAG GGTTCTCTGT GCTTCGGGCG
CTGCGTATCC TGCGCGTGCT GCGCGTGATT TCGGTCGCGC CCCGTTTGCG CCGCGTGGTG
GAGGGGTTCA TCACTGCCTT GCCGGGTATG GGATCGGTGT TCCTGCTGAT GGCGATCATC
TTCTACATTG GTGCCGTCAT GGCGACGAAG CTCTTTGGAG ACAGCTTTCC AGACTGGTTC
GGCAGTCTTG CGCTTTCGGC TTATTCGCTG TTCCAGATCA TGACGCTTGA GAGCTGGTCG
ATGGGAATCG TGCGCCCGGT GATGGACATC TACCCCTATG CCTGGGCGTT CTTTGTGCCC
TTCATTATGG TCACGACCTT TGCGGTGGTG AACTTGCTTG TGGGTTTGAT CGTGAACTCG
ATGCAGGATG CCCATTCCGA AGAAGAGGGC GAGCGCACCG ATGCCTATCG CGATCAGGTC
CTGTCGCGGC TCGAGGCCAT CGAGGCGAGT CTTGCTCGGT TGCAGGACGA CAAGACGCAA
AAGTGA
|
|---|
| Protein sequence | MIDRLKSVLD SDGFSRFITA VILVNAVTLG METSDTIMQR MGQLVLLIDK VCLIIFVTEI
AAKLLVRRHR FFLSGWNIFD FLIVGVALVP GAQGFSVLRA LRILRVLRVI SVAPRLRRVV
EGFITALPGM GSVFLLMAII FYIGAVMATK LFGDSFPDWF GSLALSAYSL FQIMTLESWS
MGIVRPVMDI YPYAWAFFVP FIMVTTFAVV NLLVGLIVNS MQDAHSEEEG ERTDAYRDQV
LSRLEAIEAS LARLQDDKTQ K
|
|---|
| |