| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2893 |
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| Symbol | |
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| ID | 4078571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3062720 |
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| End bp | 3064564 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008222 |
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| Product | ABC transporter related |
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| Protein accession | YP_614887 |
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| Protein GI | 99082733 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTG GAAACCTGAT CGACGCATTT CAACCCGCTG ATGGTCCGCC GCCACAGACA
TTGGGGGCGT TCTTGCGCTG GTGTCTCTCC GGCGCTTGGC CAATGCTGGT AATTGCGGCG
ATCTGCTCTG CGCTTGCGGG CGGGATGGAG GCGGGAACGG CCTTTATCCT CGGCAAGGTG
ATCGACACAG CGATTGCCAG CGGGCCGGAG GGGTTCTTTG GTGCCAATAT TGGGGTCATT
TTCGCAGCTT TGGCGTTTTT CTTGCTCCTC AGGCCTCTGC TCTTTGGCCT CTCTGCGGCG
ACCAACGCGA TCATTTTGCA GCCGAACGTC AATCCATTGG TTCTATCGCG CCTCAATCGT
TGGACATTGG GGCAGTCCGT CCGTTTCTTC GACGATGATT TCGCTGGTCG TATCGCACAA
AAGCAGATGC AGACCGCCAG CGCCGTGACC TCCGTTGTGA CCGAAGTCAT CAATGTGGTC
GCCTTTGCAT TGGCGTCGCT TGTGGGGGCG ATGGTGTTGC TCGGTTCCGT CGATCTGCGC
ATCACCCTGC TGTTTGTGGT CTGGTTGGTT GCGTATTTTG CCCTGATCCG CTGGTTTTTG
CCGCGCATCC GGAAAAAGTC GGCCCATCGT GCGGGCGCGC GTGCCAATGT GTCCGGGCAG
GTGGTCGACA CCATCACCAA CATCAAGACG GTACAGCTAT TTGCGCATTC TGCGCATGAG
GAACGCAGCG CCCAGGATGC CATGGTGACA TTTCGCGACC GGGCGCTCGA ATTTGGGTAT
CTGTCGGCCG CTTTCCGATT CTGTCTGATG ACCCTTGCCG GGGTCTTGCC CGTGCTTTTG
ATCGGTGCTG CGCTGTGGCT GTGGCAAAAC GGAAGCGCCA GCGAAGGGGA TATCGTTGCG
GCTGGCGCTG TCTCTATCCG TATTGCGCAA ATGACGGGCT GGGTGAGCTT CACCTTGATG
GCGATCTACT CCAACGTCGG AGAGGTCGAG AACGGTATGA AGACTCTGAC GCGCCCGGAT
CGCATCGAGG ATCGGCAGGA CGCCGAAGGA CTTCGGGTGA CATCGGGACA GATCGTGATC
GAGGATCTGG GCTTTCGCTA TGGGCGCGAC ATCGGAGGGA TCTCCGATCT GTCACTGGCG
ATACAACCGG GCGAAAAACT CGGTATTGTT GGCGCGTCCG GAGCTGGAAA ATCGACACTG
GTTTCGCTTC TTTTGCGGCT CTATGAGGCG GAAAAGGGCC ATATCCTGAT TGATGGCGCG
GATATCTCCA GAGTGAGCCA GGATTCGCTT CGCAGCCAGA TCGGTATGGT CACGCAGGAA
ACGGCGATGT TCAATCGCTC GGCGCTCGAC AACATTCTCT ATGGCCGTCC GGATGCAAGC
CGCGACGATG TGATTGCCGC TGCCAAGGCG GCCGAAGCGG ATGCCTTCAT CGCGGATCTC
GAAGACGCAC AGGGCCGCAC CGGGTATGAC GCCTTTCTCG GCGAGCGCGG TGTGAAGCTT
TCTGGTGGGC AGCGCCAAAG GATCGCGCTT GCCCGTGCCA TTCTGAAAGA TGCGCCCATC
CTGGTCCTCG ACGAGGCGAC ATCTGCGCTC GATTCGGAGG TTGAGGCATC CATCCAATCT
GCTCTGACGC GGGTGATGGA TGGCAAAACC GTGCTAGCGA TCGCGCACCG CCTGTCAACG
CTGACGGAAA TGGATCGAAT TGTTGTTATG GATCAGGGGC GCATCATCGA GCAGGGCAGC
CACGAGCAGC TGCTGGAGCG CAACGGGCTC TATGCGCAGT TCTGGAACCG GCAGTCTGGC
GGTTTCATTC GCACCCAAGA CGCGCCAAGC GCCGCCGCAC AGTAA
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| Protein sequence | MKLGNLIDAF QPADGPPPQT LGAFLRWCLS GAWPMLVIAA ICSALAGGME AGTAFILGKV
IDTAIASGPE GFFGANIGVI FAALAFFLLL RPLLFGLSAA TNAIILQPNV NPLVLSRLNR
WTLGQSVRFF DDDFAGRIAQ KQMQTASAVT SVVTEVINVV AFALASLVGA MVLLGSVDLR
ITLLFVVWLV AYFALIRWFL PRIRKKSAHR AGARANVSGQ VVDTITNIKT VQLFAHSAHE
ERSAQDAMVT FRDRALEFGY LSAAFRFCLM TLAGVLPVLL IGAALWLWQN GSASEGDIVA
AGAVSIRIAQ MTGWVSFTLM AIYSNVGEVE NGMKTLTRPD RIEDRQDAEG LRVTSGQIVI
EDLGFRYGRD IGGISDLSLA IQPGEKLGIV GASGAGKSTL VSLLLRLYEA EKGHILIDGA
DISRVSQDSL RSQIGMVTQE TAMFNRSALD NILYGRPDAS RDDVIAAAKA AEADAFIADL
EDAQGRTGYD AFLGERGVKL SGGQRQRIAL ARAILKDAPI LVLDEATSAL DSEVEASIQS
ALTRVMDGKT VLAIAHRLST LTEMDRIVVM DQGRIIEQGS HEQLLERNGL YAQFWNRQSG
GFIRTQDAPS AAAQ
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