| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2892 |
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| Symbol | |
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| ID | 4078570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3060885 |
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| End bp | 3062723 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638008221 |
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| Product | ABC transporter related |
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| Protein accession | YP_614886 |
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| Protein GI | 99082732 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGCT TCTTTGAAAA TCTCATAAAC CCCTATTGCG ACTATCCGGA AACGGATGTT
CCACCGACCC GGCTCTGGCC ATTCATGCGA GAGTACGCCC GTCCTTTCCG GTCTGTCTTT
TGGATGGCGG GGCTGATGTC CATTGTTGTC GCCGCAATCG AAGTTGGCTT GATCTCTTAT
ATGGGGCGGG TTGTGGACAT CCTTGCAGGC CCCCCGGAGG AAGTCTGGGC CACGCATGGC
ACAGAGCTGA TCGGGATGGC CCTGTTCATC CTCTTGGTGC GACCGGTGTT GCAGCTGGTG
GATGTGTTGC TGCTCAACAA TACGATTTTG CCGAACTTCG GCACGCTGAT CCGCTGGCGC
GCGCATAAAC ATGTCCTGCG GCAGTCCGTG GGTTGGTTTG AAAACGATTT TGCAGGGCGC
ATCGCCAACC GTATCATGCA AACGCCGCCC GCTGCGGGCG AGGTCGTATT TCAGGTCTTT
GATGCGATCA CCTTTGCGCT GGCTTATCTG ATCGGTGCGG CGGTATTGCT CTGGGGTGCT
GATCCACGTC TGTTGATGCC GCTCATCATC TGGTTTGTGC TATATGCAGC CCTGATCCGT
TGGACCATCA AGCGGGTGGG ACCGGCGAGC CAGGCCGCAT CGGATGCGCG TTCCACTGTG
ACCGGGCGGG TTGTGGACAG CTATTCCAAC ATTCATTCAG TGAAAATGTT TGCCCACCAC
AGCCGCGAGC TCGACTACGC CAAAGATGCC ATCGAGAACA CGCGCCGCAC CTTTCAGGCG
GAAATGCGGA TCTTTACGAT CATGGATGGC GTTCTTGTGT TGTTGAATGG CCTCCTGATT
GTCGGGGTTG TGGGTTGGGG CATTGCGCTC TGGATGCAGG GACTGGCTTC GGTGGGAGTT
GTGGCAGCTG CAACCGCCTT GACGCTGCGG CTGAACGCGA TGACCGGATG GATCATGTGG
GCACTTACCA GCTTCTTCCG TCAACTCGGG GTCGTGGCCG AAGGCATGGA AACGATTGCG
CAACCCATCG AGTTGGTGGA CACCGAGGAT GCCAAACCTT TGCATCTCAG TAAAGGAGAG
ATCACCTTTG ACGCGCTGTC TCATCACTAC GGGCGGGGCG CGGGCGGGCT TGATCGGCTT
AACCTTACGA TCCACCCGGG AGAAAAGGTC GGCCTTGTTG GGCGCTCTGG TGCTGGCAAG
TCCACCCTCG TGATGCTGCT GCTCAGGTTC TATGACCCCG AGGAAGGGCG CATTCTGATC
GACGGGCAGG ATATATCGCA GGTGCTTCAG GATAGCCTGC GCCAGCATAT CGGGATGGTG
CAGCAAGACA GCTCGCTCCT GCATCGCTCG GTCTGCGATA ATCTTCTCTA TGGTCGCCCC
GATGCATCCG AAGAAGAGAT GATCGCAGCT GCCCAGAAGG CTCACGCGCA TGACTTCATT
CTTGATCTCG AAGACCCCCA GGGGCGCAAG GGATATGACG CCCATGTCGG CGAACGTGGG
GTGAAGCTCT CCGGTGGGCA GAGACAGCGG GTGACGCTGG CGCGTGTAAT TTTGAAAGAT
GCACCCATCC TTTTGCTGGA CGAGGCGACC TCTGCGCTCG ACTCAGAGGT CGAGGCCGCC
ATCCAGGAGA CGCTCTATGG CATGATGGAG GGCAAAACGG TGATCGCCAT CGCGCATCGA
CTTTCGACCA TCGCGCAGAT GGACCGGATT TTGGTGCTCA ATGAGGGAAA AATCGTCGAA
CAGGGTACAC ACGAAGCGCT TTTGTCAGAG GGTGGCCTAT ATGCACAGTT CTGGGCGCGC
CAATCGGGCG GGTTCCTGAA TATAGAGGCC GCAGAATGA
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| Protein sequence | MFRFFENLIN PYCDYPETDV PPTRLWPFMR EYARPFRSVF WMAGLMSIVV AAIEVGLISY
MGRVVDILAG PPEEVWATHG TELIGMALFI LLVRPVLQLV DVLLLNNTIL PNFGTLIRWR
AHKHVLRQSV GWFENDFAGR IANRIMQTPP AAGEVVFQVF DAITFALAYL IGAAVLLWGA
DPRLLMPLII WFVLYAALIR WTIKRVGPAS QAASDARSTV TGRVVDSYSN IHSVKMFAHH
SRELDYAKDA IENTRRTFQA EMRIFTIMDG VLVLLNGLLI VGVVGWGIAL WMQGLASVGV
VAAATALTLR LNAMTGWIMW ALTSFFRQLG VVAEGMETIA QPIELVDTED AKPLHLSKGE
ITFDALSHHY GRGAGGLDRL NLTIHPGEKV GLVGRSGAGK STLVMLLLRF YDPEEGRILI
DGQDISQVLQ DSLRQHIGMV QQDSSLLHRS VCDNLLYGRP DASEEEMIAA AQKAHAHDFI
LDLEDPQGRK GYDAHVGERG VKLSGGQRQR VTLARVILKD APILLLDEAT SALDSEVEAA
IQETLYGMME GKTVIAIAHR LSTIAQMDRI LVLNEGKIVE QGTHEALLSE GGLYAQFWAR
QSGGFLNIEA AE
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