Gene TM1040_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2889 
Symbol 
ID4076423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp3057918 
End bp3058895 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content59% 
IMG OID638008218 
ProductHsp33 protein 
Protein accessionYP_614883 
Protein GI99082729 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTTG GTTCAAAAAT CGCGTGGGAC GACACCGTCC TGCCCTTCCA GCTTGATGCA 
TCCGACATGC GTGGCCGCGT GGCGCGGCTG GACGGTGTGT TGGATGGTAT CCTGAAACAA
CACAATTATC CGCAACCGGT CGAGGCACTG GTGGCTGAGA TGGCGCTGCT TACTGCGCTG
ATCGGTCAGA CCATGAGCCT GCGTTGGAAG CTGTCTTTGC AAGTTCAGTC CAAGGGAGCG
GTGCGGATGA TTGCTACCGA TTACTACGCC CCCGAAAAGG AAGGCGAGCC TGCCCGAATT
CGCGCCTATG CGAGTTTTGA CGCTGATCGT ATCACGGATG GCGCTCCTTT TGCCCAACTG
GGCGATGGCT ACTTCGCAAT CCTGATCGAT CAGGGTGGAG GAACGAAGCC CTATCAAGGG
ATTACGCCGC TGGCGGCAAC GTCTTTGTCG GAATGTGCGC AGGCCTATTT TGCGCAGTCC
GAACAGCTGC CGACGCGTTT TTCGCTCAGC TTTGGCAAGT CCTCCGAGCC GGGCAAGCCC
GAGCACTGGC GCGCAGGTGG CATCATGCTG CAGCATATGC CCAAGGCCTC TCCGTTCGCC
GCTGAGGCCA GTGGCACTGG GGATGTCTTG ACCGCCTCTG ATCTGGTCTC CGGCGAAGAA
GAAGAAAACT GGAATCGCGT CAACATCTTG CTGGAAACGG TCGAAGATCT TGAGCTGATC
GGCCCCTCGG TATCGCCCAG CGAGCTGCTT TTGAGGCTGT TCCATGAGGA GCGGCCACGG
GTTTATGACG CGCAATCTGT CCGTTTCGGC TGCACATGCT CCGAAGAACG GGTGCGACAG
AGCCTGTCGA TCTATTCCGC AAAGGATATC GGAACAATGA CCACCGAGGA CGGGCGCGTC
ACCGCGGATT GTCAGTTCTG CGGCGCGCAT TACGATCTTG ATCCGGCGAC GGTTGGTTTC
GACGCGGCAG GGGACTGA
 
Protein sequence
MTLGSKIAWD DTVLPFQLDA SDMRGRVARL DGVLDGILKQ HNYPQPVEAL VAEMALLTAL 
IGQTMSLRWK LSLQVQSKGA VRMIATDYYA PEKEGEPARI RAYASFDADR ITDGAPFAQL
GDGYFAILID QGGGTKPYQG ITPLAATSLS ECAQAYFAQS EQLPTRFSLS FGKSSEPGKP
EHWRAGGIML QHMPKASPFA AEASGTGDVL TASDLVSGEE EENWNRVNIL LETVEDLELI
GPSVSPSELL LRLFHEERPR VYDAQSVRFG CTCSEERVRQ SLSIYSAKDI GTMTTEDGRV
TADCQFCGAH YDLDPATVGF DAAGD