Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2880 |
Symbol | |
ID | 4076414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 3050862 |
End bp | 3051143 |
Gene Length | 282 bp |
Protein Length | 93 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638008209 |
Product | sterol-binding |
Protein accession | YP_614874 |
Protein GI | 99082720 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3255] Putative sterol carrier protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.933965 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGAAC AGATCGCGAC AGACATCCGC AAGGGTCTGG ATGGCAAGAG CTTTGATGGC TCCTTGAAGT TCGACTGCGG TTCAGACGGG GTGATTGTTC TCGACAATGG TCGCGTGACG ACAGACGAGC TTTCAACCGA TTGCACCTTG CGGCTCTCGA CCGAAAATCT GAAAAAGCTG CTGCGCGGGC AGCTCAACCC GATGACGGCA GTGATGATGG GCAAGATCAA GATCTCTGGC GATATGGGGG TTGCGATGAA GCTTGGAAAG CTCATCGGCT GA
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Protein sequence | MLEQIATDIR KGLDGKSFDG SLKFDCGSDG VIVLDNGRVT TDELSTDCTL RLSTENLKKL LRGQLNPMTA VMMGKIKISG DMGVAMKLGK LIG
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