Gene TM1040_2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2880 
Symbol 
ID4076414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp3050862 
End bp3051143 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content55% 
IMG OID638008209 
Productsterol-binding 
Protein accessionYP_614874 
Protein GI99082720 
COG category[I] Lipid transport and metabolism 
COG ID[COG3255] Putative sterol carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.933965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAC AGATCGCGAC AGACATCCGC AAGGGTCTGG ATGGCAAGAG CTTTGATGGC 
TCCTTGAAGT TCGACTGCGG TTCAGACGGG GTGATTGTTC TCGACAATGG TCGCGTGACG
ACAGACGAGC TTTCAACCGA TTGCACCTTG CGGCTCTCGA CCGAAAATCT GAAAAAGCTG
CTGCGCGGGC AGCTCAACCC GATGACGGCA GTGATGATGG GCAAGATCAA GATCTCTGGC
GATATGGGGG TTGCGATGAA GCTTGGAAAG CTCATCGGCT GA
 
Protein sequence
MLEQIATDIR KGLDGKSFDG SLKFDCGSDG VIVLDNGRVT TDELSTDCTL RLSTENLKKL 
LRGQLNPMTA VMMGKIKISG DMGVAMKLGK LIG