Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2879 |
Symbol | |
ID | 4076413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 3050052 |
End bp | 3050723 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638008208 |
Product | peptide methionine sulfoxide reductase |
Protein accession | YP_614873 |
Protein GI | 99082719 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.667528 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGTC TGGACACACT CAAACATTTC ACATTGGCGG CGCTGATCAT CGTTGGCGTC CTGACCAAAG GCAGCGCGTT GCGCGCGCAA ACTCAGGACA CGCTCATTGT TGCAGGCGGA TGCTTCTGGT GTGTCGAGAG CGATTTTGAA TCCGTGCGGG GCGTGTCAGA GGCGATTTCC GGCTACACTG GTGGTACCAC TGAGAACCCG ACCTACAAAC AGATCGGCAG TGGGCGCACA GGACATTACG AAGCAGTCAA AATCCTCTTC GATCCGACCA TCGTCAGCCG CGAGAGCCTT TTGGACCTGT TTTTCCGATC CATTGATCCT ACGGATACAG GGGGTCAATT CTGCGATCGC GGCGCCCCGT ATAGGACTGC TGTTTTTGTC TCTAACGAAG ACGAAAAGGC CATTGCACAA GCCGTAAAAG CAGAGGCAGA GGCGGAGCTT GGGCAGCAGA TTGTAACGCC AATTCTTGAA GCCTCGCCTT TCTATGAGGC CGAAGCCTAC CATCAGGACT ACTACAAGGG AGAGGGTCTG GTTCTGACCC GTTTTGGACC CTTACGCCAG TCAAAGGCCT ATGTCCGCTA TCGCAAAGCC TGTGGGCGCG ACGCGCGAAT TGCAGAGCTT TGGGGGCGCG ATGCGCCTTT CATTGGAAGC TACGGGTTTT GA
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Protein sequence | MGRLDTLKHF TLAALIIVGV LTKGSALRAQ TQDTLIVAGG CFWCVESDFE SVRGVSEAIS GYTGGTTENP TYKQIGSGRT GHYEAVKILF DPTIVSRESL LDLFFRSIDP TDTGGQFCDR GAPYRTAVFV SNEDEKAIAQ AVKAEAEAEL GQQIVTPILE ASPFYEAEAY HQDYYKGEGL VLTRFGPLRQ SKAYVRYRKA CGRDARIAEL WGRDAPFIGS YGF
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