| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2877 |
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| Symbol | |
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| ID | 4076411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3046844 |
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| End bp | 3049099 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638008206 |
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| Product | malic enzyme |
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| Protein accession | YP_614871 |
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| Protein GI | 99082717 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.857329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAG CCAAGATTAC CGATGAAGAG GCACTGGCCT TTCACTTGGA ACCCAGCCCC
GGTAAATGGG AGGTCACCGC GACGGTTCCG ATGACCACGC AGCGGGATCT GTCCTTGGCC
TATAGCCCCG GTGTTGCGGT GCCTTGCGAA GCCATCGCTG AAAACCCCGA AACCGCCTAT
GACTACACAA ACAAGGGCAA TCTTGTTGCG GTGATCTCCA ATGGGACCGC CGTTCTGGGT
CTTGGCAACC TCGGCGCGCT GGGTTCAAAG CCCGTGATGG AAGGGAAATC GGTCCTCTTC
AAACGCTTTG CAGATGTGAA CTCGATCGAC ATCGAACTCG ACACCGAGGA CCCGGACGAA
TTCATCAAGG CGGTTAGACT GATGGGGCCG ACCTTTGGCG GCATCAACCT TGAGGACATC
AAGGCGCCCG AGTGTTTCAT CATCGAACAG AAGCTCAAGG AAGAGATGGA CATTCCGGTC
TTCCATGACG ACCAGCATGG CACCGCCGTG ATCTGCGCCG CCGGTCTGAT CAACGCGCTG
CATTTATCGG GCAAGAAGAT CGAAGATGTG CGGATTGTCC TCAATGGGGC AGGGGCGGCG
GGCATTGCTT GTATTGAGCT CTTGAAATCC ATGGGCGCGC GGCACGAAAA CTGCATCGTC
TGCGACACCA AGGGCGTGAT CTATCAGGGC CGTACCGAGG GGATGAACCA GTGGAAGTCA
GCGCATGCGG TGAAGACAGA ACTGCGCTCG CTCGAAGAAG CCATGAATGG CGCGGATGTA
TTCCTTGGCG TTTCGGTCAA AGGTGCGGTG ACGCAGGACA TGGTAAAATC CATGGCCGAC
AACCCGGTTA TCTTTGCGAT GGCAAACCCC GATCCGGAAA TTACGCCCGA AGAGGCGCAT
GAGGTTCGCG TGGATGCGAT CGTGGCGACG GGACGTTCGG ACTATCCGAA CCAGGTAAAC
AACGTTCTCG GCTTTCCTTA TCTCTTCCGC GGAGCGCTCG ATATTCATGC CCGGGCCATC
AATGATGAGA TGAAGATCGC CTGCGCGCAT GCTTTGGCGC GCCTTGCGCG CGAGGATGTG
CCGGATGAGG TCGCGCTGGC CTATGGTAAA TCCCTGTCCT TTGGTCGCGA CTACATCATC
CCGACGCCCT TTGATCCACG CCTGATCCAC CGCATTCCGC CAGCGGTTGC CAAGGCCGGC
ATGGATACTG GTGTAGCCCG TCGTCCGATC ATCGATATGG ACGCCTACGA ACACGGTCTG
CGCGGACGTA TGGACCCGAC GCAATCGATC TTGCGCGGTC TCAATGCACG CGCGCGTGCA
GCGCAGTCGC GGATGATCTT CGCCGAAGGT GATGATCCAC GCGTTCTGCG TGCAGCCGTC
ACCTATCAGC GCTCAGGATT TGGCAAGGCT CTGGTCGTGG GACGTCAGGA CGACGTCAAA
GCCAAACTTG AAGAAGCGGG TCTGGGCGAT GCCGTGCGTG AGCTGGAGGT CGTGAACGCC
GCCAATACGC ATCACTTTGA AACCTATAAG GATTTCCTTT ACGAGAGACT GAACCGCAAA
GGGTTTGATC GCAAGGATAT TCACCGTCTG GTGGGGCGTG ATAGACATGT GTTCTCTGCG
CTGATGCTTG CACATGGACA TGGCGACGGT CTGGTTTCGG GCGCGACTCG CAAGTCTGCG
CATGTGCTCG ACCGGATCAA CCATGTGTTC GACGCAGATG CGGAACATGG TGCCGCTGGG
GTCACGGCAT TGCTTCACAA GGGTCGCATT GTCTTGATCG GAGACACGCT CGTTCATGAA
TGGCCTGACG AGAATGACCT AGCCACCATT GCAGAGCGTG CAGCTGGTGT GGCGCGCCAC
ATGGGTCTTG ATCCGCGTGT GGCCTTCGTC AGTTTTTCGA CCTTCGGCTA TCCGGTCTCG
GAGCGGGCGG AGAAGATGCA TATTGCGCCA ACCGTGCTTG ATAAACGCGG TGTAGATTTT
GAATACGAAG GCGAAATGAC CGTAGATGTC GCCCTCAACG CCAAGGCGCA GGAGCATTAT
CCGTTCCAGC GCCTGTCTGG TCCGGCCAAT ATCCTGGTGG TTCCGGCGCG TCACTCGGCA
TCGATCTCGG TGAAGCTGAT GCAGGAGATG GGTGGTGCCA CGGTTGTGGG TCCGATCCTT
TCGGGTGTCG ACAAACCGAT CCAGATCTGC TCCACCACCT CGACCGCAAA TGACGTGCTG
AACATGGCCG TTCTTGCGGC CTGCAACATC GGTTGA
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| Protein sequence | MPKAKITDEE ALAFHLEPSP GKWEVTATVP MTTQRDLSLA YSPGVAVPCE AIAENPETAY
DYTNKGNLVA VISNGTAVLG LGNLGALGSK PVMEGKSVLF KRFADVNSID IELDTEDPDE
FIKAVRLMGP TFGGINLEDI KAPECFIIEQ KLKEEMDIPV FHDDQHGTAV ICAAGLINAL
HLSGKKIEDV RIVLNGAGAA GIACIELLKS MGARHENCIV CDTKGVIYQG RTEGMNQWKS
AHAVKTELRS LEEAMNGADV FLGVSVKGAV TQDMVKSMAD NPVIFAMANP DPEITPEEAH
EVRVDAIVAT GRSDYPNQVN NVLGFPYLFR GALDIHARAI NDEMKIACAH ALARLAREDV
PDEVALAYGK SLSFGRDYII PTPFDPRLIH RIPPAVAKAG MDTGVARRPI IDMDAYEHGL
RGRMDPTQSI LRGLNARARA AQSRMIFAEG DDPRVLRAAV TYQRSGFGKA LVVGRQDDVK
AKLEEAGLGD AVRELEVVNA ANTHHFETYK DFLYERLNRK GFDRKDIHRL VGRDRHVFSA
LMLAHGHGDG LVSGATRKSA HVLDRINHVF DADAEHGAAG VTALLHKGRI VLIGDTLVHE
WPDENDLATI AERAAGVARH MGLDPRVAFV SFSTFGYPVS ERAEKMHIAP TVLDKRGVDF
EYEGEMTVDV ALNAKAQEHY PFQRLSGPAN ILVVPARHSA SISVKLMQEM GGATVVGPIL
SGVDKPIQIC STTSTANDVL NMAVLAACNI G
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