| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2873 |
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| Symbol | hrcA |
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| ID | 4076407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3041186 |
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| End bp | 3042250 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638008202 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_614867 |
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| Protein GI | 99082713 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.192167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACG CGAACTCAAT TCTTCAGGAC ATGAACGACC GCTCTCGAGA GGTGTTTCGG
ATCCTGGTTG AAAACTACCT TGATACGGGT GGTCCGGTTG GTAGCCGCAC GTTGACGCGC
TCTCTGAGCG AGAAGGTGAG CGCGGCTACC GTTCGAAATG TCATGCAGGA CTTGGAATAT
CTTGGTCTTC TGGACAGTCC GCATGTCAGC GCGGGACGTA TTCCGACGCA GATGGGGCTG
CGTCTGTTTG TCGATGGTCT ATTGCAAATG GGAGACCCGA GCCGCCAGGA TCGGGAGATG
ATCGACCGCA CGCTTGGGGA CAATTCAAGC GATGTTGGTG GGATGCTCGA CCGGGTTGGG
GCGGCTCTTT CAGGTGTCAC GCATGGGGCA TCGCTTGTGT TGACTCCCAA ACACGAAGCA
GAGCTGCGCC ATATCGAATT TGTGTCTTTG GCTCAGGACC GCGCGCTGGT GGTACTGGTG
TTTTCCGACG GGCATGTGGA GAACCGTTTG TTTACGCCAC CTCCCGGACA GACTCCGAGC
TCGATGCGCG AGGCTGCGAA TTTCCTCAAT GCCCTGATCG AAGGGCGGAC CCTGAGCGAC
GTGCGCAAGG ATGTTCAGGG GGAAATCGAA CGGAGGCGTC AGGAGATCGA TTCCCTCGCG
CACGAAATGA TCGAAAGCGG GCTCGCTGCC TGGGAAGACG AGGGCAGCGA TCAGGCGCGC
TTGATCGTGC GCGGGCGGGC GAATCTCTTG TCAGAGGACG GCGCGCCGGA TGAATTGGAA
AAGATCCGCA GCCTGTTTGA TGACCTGGAG CGCAAGCGAG ACATTGCCGA ATTTCTCGAA
CTGACCGAAG AAGGTGACGG TGTGCGCATT TTTATCGGCT CAGAGAACAA ACTTTTCTCA
CTTTCGGGTT CCTCTTTGGT GGTGTCTCCT TATATGAACG CTGATCGAAA GATCATCGGT
GCGGTCGGGG TGATCGGCCC CACGCGCCTG AACTACGGAC GGATTGTGCC GATCGTGGAC
TATACGGCAC AACTGGTCGG GAAAATGGTA TCCGACCGGA GCTAG
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| Protein sequence | MTDANSILQD MNDRSREVFR ILVENYLDTG GPVGSRTLTR SLSEKVSAAT VRNVMQDLEY
LGLLDSPHVS AGRIPTQMGL RLFVDGLLQM GDPSRQDREM IDRTLGDNSS DVGGMLDRVG
AALSGVTHGA SLVLTPKHEA ELRHIEFVSL AQDRALVVLV FSDGHVENRL FTPPPGQTPS
SMREAANFLN ALIEGRTLSD VRKDVQGEIE RRRQEIDSLA HEMIESGLAA WEDEGSDQAR
LIVRGRANLL SEDGAPDELE KIRSLFDDLE RKRDIAEFLE LTEEGDGVRI FIGSENKLFS
LSGSSLVVSP YMNADRKIIG AVGVIGPTRL NYGRIVPIVD YTAQLVGKMV SDRS
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