| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2872 |
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| Symbol | rph |
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| ID | 4076406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3040334 |
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| End bp | 3041047 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008201 |
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| Product | ribonuclease PH |
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| Protein accession | YP_614866 |
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| Protein GI | 99082712 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.51038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0590595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACCCT CTGGACGTGC CCTGAATGAA ATGCGCAGCG TTTCCATTGA AACCGGCTTT
ACCAAACATG CAGAAGGTTC CTGCCTGATC AAGATGGGTG ACACGCACGT TTTGTGTACC
GCAACCATCG AAGACCGTGT TCCGCCGTTC ATCAAAGGCT CTGGCCTTGG TTGGGTTACA
GCAGAATACG GCATGCTGCC CCGCGCCACC AATACCCGGA TGCGGCGTGA AGCGGCGTCG
GGCAAGCAAG GTGGCCGCAC CGTCGAGATC CAGCGTCTCA TTGGACGCGC CCTGCGCGCA
GGCGTCGACC GCGTGGCCTT GGGTGAACGT CAGATCACCG TCGACTGCGA CGTGCTCCAG
GCCGATGGCG GTACGCGCTG TGCCTCGATC ACCGGTGGTT GGGTTGCGCT GCGTCTGGCT
GTCAACAAGC TGATGAAGGC CGGCGATGTT ACCATGGATC CTCTTGTCGA TCCCGTCTCC
GCAATCTCCT GCGGGATCTA CGCTGGCCAA CCCGTGCTTG ATCTTGATTA CCCCGAAGAT
TCCGAAGCGG GCGTTGACGG CAACTTTATC ATGACTGGAT CCGGCAAACT TATCGAGGTC
CAGATGAGCG CCGAGGGGTC TGTTTTCTCT CGCGATCAGA TGAACGAACT AATGGATCTC
GCGGCTAAAG GAACATCCGA GCTGGCGGAA ATGCAAAAGG CCGCCTGCGC ATGA
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| Protein sequence | MRPSGRALNE MRSVSIETGF TKHAEGSCLI KMGDTHVLCT ATIEDRVPPF IKGSGLGWVT
AEYGMLPRAT NTRMRREAAS GKQGGRTVEI QRLIGRALRA GVDRVALGER QITVDCDVLQ
ADGGTRCASI TGGWVALRLA VNKLMKAGDV TMDPLVDPVS AISCGIYAGQ PVLDLDYPED
SEAGVDGNFI MTGSGKLIEV QMSAEGSVFS RDQMNELMDL AAKGTSELAE MQKAACA
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