| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2871 |
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| Symbol | |
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| ID | 4076405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3039723 |
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| End bp | 3040337 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638008200 |
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| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
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| Protein accession | YP_614865 |
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| Protein GI | 99082711 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.302745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.17342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCGGA AATTTAACGG CGACACTCTG CTCGTCGCCA CCCACAACGA AGGCAAACTA
GGCGAGATCA CCGAGATCCT CGCCCCCTTC GGTGTCAAGG TTGTGGGTGC CGGCGAGTTG
AACTTGCCCG AACCCGAGGA AACCGAGGAC ACCTTTGTCG GGAACGCCCG CATCAAGGCA
CATGCTGCAG CCAAGGCAAC GGGCCTCCCG GCGCTGTCGG ATGACAGTGG GATCACCATC
GACGCTTTGG ACGGAGCGCC CGGGGTATAC ACCGCTGACT GGGCCGAGAC CAACAACGGG
CGCGATTTCA TGAAGGCGAT GACCCGCGCC AATGATGAAA TTACCGCAAA AGGTCCCGAT
GCCCCGCGCA CGGCGCAGTT CCGTTGCACC TTGGTCCTCG CATGGCCTGA TGGTCATGAC
GAAGTCTTCG AGGGCGTCAT GGCCGGAAGC CTCGTCTGGC CGATCCGAGG CGAAGGTGGC
TTTGGCTATG ATCCGATGTT CATGCCCGAA GGCTACGATG TGACCTGCGC ACAACTCGAC
AAAGACGAGA AAAACCGCAT AAGCCACCGC GGTCGGGCCC TCGCAAAATT TGTGCAGGGT
TGCTTTGGTG GATGA
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| Protein sequence | MTRKFNGDTL LVATHNEGKL GEITEILAPF GVKVVGAGEL NLPEPEETED TFVGNARIKA
HAAAKATGLP ALSDDSGITI DALDGAPGVY TADWAETNNG RDFMKAMTRA NDEITAKGPD
APRTAQFRCT LVLAWPDGHD EVFEGVMAGS LVWPIRGEGG FGYDPMFMPE GYDVTCAQLD
KDEKNRISHR GRALAKFVQG CFGG
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