Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2866 |
Symbol | |
ID | 4076400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 3035889 |
End bp | 3036506 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638008195 |
Product | methyltransferase GidB |
Protein accession | YP_614860 |
Protein GI | 99082706 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0426802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.092936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATG GTCGAGGAAA CTTGGAACTT GATGTTTCAC GTGAAACATT AGAACGACTG ATGGTCTTCT CAGAGGTCCT TAAAAAGTGG AACCCGAAGA TCAACCTGGT TTCTAGAAAG AGCATCGACG ATCTTTGGAC CCGTCACATT CTGGATAGCA TTCAAGTCTT TGATGCCGCT CCAGAGGGCG GGGCTTGGCT AGATATCGGG AGCGGTGGTG GACTTCCTGG CATTATTGTC GCGATTTTGG CAGCGGAAAA GTCACCGGAT ACTCGGATTA CGCTAATGGA GAGTGATCTG AGAAAATGTG CTTTCCTGCG TAATGCAGCA CGAGAGTGCG GTGTGTCAGT AACGGTTAAG TCGAAACGTA TCGAGAGTGC CCCAGAAGAA AATTGTGACG TCTTATCTGC ACGCGCGTTG GCCGATCTTG ATAATCTCTT GGGGTTTGCT GAACGTCATC TCGCCGAAAA TGGTACAGCG ATGTTTCCGA AGGGCGCGAA CTGGAAAAAA GAGGTGGATA ACGCGCGCAA GAGATGGCGG TTTGAGTGCG ATGAGATTAC AAGTGTAACT GAGCCTGGTG CTGTCATCCT CAAGATAAAG GGAGTAGAGC GTGTCTGA
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Protein sequence | MSDGRGNLEL DVSRETLERL MVFSEVLKKW NPKINLVSRK SIDDLWTRHI LDSIQVFDAA PEGGAWLDIG SGGGLPGIIV AILAAEKSPD TRITLMESDL RKCAFLRNAA RECGVSVTVK SKRIESAPEE NCDVLSARAL ADLDNLLGFA ERHLAENGTA MFPKGANWKK EVDNARKRWR FECDEITSVT EPGAVILKIK GVERV
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