| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2865 |
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| Symbol | |
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| ID | 4076399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3034009 |
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| End bp | 3035892 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638008194 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_614859 |
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| Protein GI | 99082705 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0529347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.105657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTCACG TGAAACATTC ACATTATGAC GTGGTTGTAG TTGGTGGTGG ACATGCTGGA
ACCGAAGCGG CTCACGCGTC CGCGAGGATG GGCGTGCGCA CCGCACTGGT GACTTTGCGA
CGTGATGGTA TCGGCGTCAT GTCTTGCAAC CCGGCGATTG GCGGTCTTGG AAAAGGTCAC
CTGGTTCGAG AAATTGACGC CCTCGACGGC GTCATGGGGC GCGTAGCCGA CCTCGCTGGT
ATTCAATTCA GGCTTCTCAA CCGACGCAAG GGGCCAGCGG TCCAAGGGCC GCGCGCCCAG
GCCGATCGCT CGATCTATCG CAAGGAAATG TTGCGTGCGA CAGAGGCACA ATCAAATCTG
GACATTATCG AAGGTGAGGT CGTTGATTTC CTGATGGAAT CTCCGACTAG GGTCCGCGGC
ATCATACTCG ACGATCAAAG TGAAATTCGT GCAGAATGCG TAGTTCTTAC GTCAGGTACC
TTCTTGAATG GAGTTATCCA TATTGGGAAT AAGTCATCGT CAGGTGGTCG CATGGGAGAC
AGGCCCTCGA TCAAACTTGC CGAGCGCTTG AAATCCTTTG AACTGCCTTT AGGTCGGCTC
AAGACCGGCA CACCTCCGCG GCTGGACGGG AGGACGATCA ACTGGGATAT ACTTGATAGT
CAACCAGGTG ATGAAGATCC TACTCTCTTC TCATTTCTGA GCACAAATAC ATCGGCACCC
CAAATCGCCT GCGGTATTAC CCATACGAAC GAGAAAACTC ACGAAATTAT CAGAGATAAT
CTCGAGCTGT CAGCTATGTA TGGTGGGCAT ATAGAAGGCG TCGGGCCTCG CTACTGCCCG
TCTATCGAAG ACAAAATCGT TCGTTTTGCG GATAAGACTT CGCATCAGAT CTTTCTGGAA
CCCGAAGGCG TGAACGATCA TACGGTTTAC CCAAACGGCA TATCAACGAG TTTACCTGAA
GATGTACAAG TGGACTACGT CCGATCAATA GTCGGCCTGG AAAATGCTGA AGTATTGCAA
CCTGGCTATG CGATTGAATA CGACTACGTT GATCCGCGCG CGCTTAGATC AACGCTAGAA
CTTCGCGATG TCGAAGGGCT CTATTTGGCG GGTCAGATCA ATGGCACCAC TGGGTATGAA
GAAGCCGCAG CTCAGGGTTT GGTGGCTGGA CTCAACGCCG CGTCCCATAG ATTGAAACAA
CAGGAAATAG TGTTTGGACG TTCGAACAGC TACATCGGAG TGATGATTGA CGATCTCATC
ACAAATGGGG TGACGGAACC CTATCGTATG TTTACGTCTC GTGCGGAGTT TAGATTGTCC
CTGAGAGCCG ACAATGCAGA CCAAAGATTG ACGCCTATCG GGTATGACCT TGGTTGTATT
TCTGAGGTAA GGAGAAGTGA ATTTGATCGC AAAATGGATG CGATAACACG AACTAAGAGC
GCGCTTACCT CTGTACTTCT TACACCCAAA CAACTTCTCG AGGCTGGTAT CCAGGTGAAT
CAGGATGGGA ACAAGCGGAA CGGGCTAGAT GTTCTCGCTT TTCCAAAAGT CGAATTTGAT
GACATTCTGC CTCTTTTTCC AGAACTAGCT GATACTGAGA CTAGTATCCG CGAACAGGTG
ACGCGGGATT CTCTGTATGC GAACTATATC GCGCGACAGG AGAAGGAAGT CGCGTCATTG
AAGCGGGATG AACAATACAG AATTCCCCGT GATTTCAGCT ATGAGATCGA TGGGCTGTCC
ATGGAGTTAC GGCAAAAGCT TGAACGTTCG AGACCTGAGA GCTTAGCGCA AGCCGCTCGA
ATTGATGGTA TGACCCCAGC CGCACTGGCG CTGATGCTTG GAAGTTTGAA GAAGCTTTCC
AGGGGCGAAA GCAAAGCATC ATGA
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| Protein sequence | MFHVKHSHYD VVVVGGGHAG TEAAHASARM GVRTALVTLR RDGIGVMSCN PAIGGLGKGH
LVREIDALDG VMGRVADLAG IQFRLLNRRK GPAVQGPRAQ ADRSIYRKEM LRATEAQSNL
DIIEGEVVDF LMESPTRVRG IILDDQSEIR AECVVLTSGT FLNGVIHIGN KSSSGGRMGD
RPSIKLAERL KSFELPLGRL KTGTPPRLDG RTINWDILDS QPGDEDPTLF SFLSTNTSAP
QIACGITHTN EKTHEIIRDN LELSAMYGGH IEGVGPRYCP SIEDKIVRFA DKTSHQIFLE
PEGVNDHTVY PNGISTSLPE DVQVDYVRSI VGLENAEVLQ PGYAIEYDYV DPRALRSTLE
LRDVEGLYLA GQINGTTGYE EAAAQGLVAG LNAASHRLKQ QEIVFGRSNS YIGVMIDDLI
TNGVTEPYRM FTSRAEFRLS LRADNADQRL TPIGYDLGCI SEVRRSEFDR KMDAITRTKS
ALTSVLLTPK QLLEAGIQVN QDGNKRNGLD VLAFPKVEFD DILPLFPELA DTETSIREQV
TRDSLYANYI ARQEKEVASL KRDEQYRIPR DFSYEIDGLS MELRQKLERS RPESLAQAAR
IDGMTPAALA LMLGSLKKLS RGESKAS
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