| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2863 |
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| Symbol | rho |
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| ID | 4076397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3031417 |
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| End bp | 3032688 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638008192 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_614857 |
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| Protein GI | 99082703 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.799607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.377015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC AATCTCTGAA CCTTTCTGAT CTCAAGGCGC AAAGCCCGAA GGCCCTGTTG
GCTATGGCTG AGGAGCTGGA GATCGAAAAC GCCTCCACTA TGCGGAAAGG CGAGATGATG
TTCCAAATCC TGCGTGAACG CGCGGATGAA GGCTGGAACA TCGGAGGGGA CGGGGTTCTC
GAGGTCCTGC AGGACGGATT TGGCTTCTTG CGCTCGCCCG AAGCAAACTA TCTGCCGGGT
CCAGACGATA TCTATGTCTC TCCTGACATG ATCCGCCAGT TTTCGCTACG CACTGGGGAT
ACGGTAGAGG GGCAGATCAA GGCACCACTG GAAAATGAGC GCTACTTTGC GCTGACCACG
GTGACAAAGA TCAACTTTGA AGAGCCCGAA AAGGCCCGTC ACAAGATTGC ATTCGACAAT
CTGACACCGC TCTATCCGGA CGAGCGTCTG CAGATGGAAA TCGAGGATCC GACGGTTAAG
GATCGCTCAG CACGCGTGAT TGACCTTGTC TCGCCGATCG GCAAGGGCCA GCGTTCGCTT
ATTGTAGCGC CGCCGCGAAC CGGTAAGACA GTTCTACTGC AAAACATCGC CCATTCGATC
GAGCAGAACC ACCCTGAGTG CTATCTGATC GTGCTTCTGA TCGACGAGCG CCCTGAAGAA
GTCACCGACA TGCAGCGCTC CGTCAAAGGC GAGGTCGTGT CCTCCACGTT TGACGAACCC
GCAGCGCGCC ACGTGGCGGT TTCCGAGATG GTCATTGAAA AAGCCAAGCG TCTGGTCGAA
CATAAACGTG ACGTTGTGAT CTTGCTCGAC TCGATCACGC GTCTCGGCCG TGCTTTCAAC
ACGGTTGTTC CATCGTCAGG CAAGGTTCTG ACTGGTGGTG TGGATGCAAA CGCTCTGCAA
CGTCCCAAGC GCTTCTTTGG GGCTGCGCGG AATATCGAAG AAGGTGGCTC TTTGACGATC
ATCGCGACCG CGCTTATCGA CACGGGCAGC CGTATGGACG AGGTTATCTT TGAAGAATTC
AAGGGTACGG GTAACTCTGA GATCGTTCTG GATCGCAAGA TTGCAGACAA GAGGGTCTTC
CCTGCGATCG ACATTCTCAA GTCGGGAACG CGGAAGGAAG ACCTCCTGGT CGACAAAGGC
GATCTGGCAA AAACCTTTGT GTTGCGTCGC ATCCTGAATC CGATGGGGAC CACCGACGCA
ATTGAGTTCC TGCTGTCTAA GTTGAAGCAA ACAAAGACAA ACTCAGAGTT TTTTGACTCG
ATGAACACCT AA
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| Protein sequence | MTEQSLNLSD LKAQSPKALL AMAEELEIEN ASTMRKGEMM FQILRERADE GWNIGGDGVL
EVLQDGFGFL RSPEANYLPG PDDIYVSPDM IRQFSLRTGD TVEGQIKAPL ENERYFALTT
VTKINFEEPE KARHKIAFDN LTPLYPDERL QMEIEDPTVK DRSARVIDLV SPIGKGQRSL
IVAPPRTGKT VLLQNIAHSI EQNHPECYLI VLLIDERPEE VTDMQRSVKG EVVSSTFDEP
AARHVAVSEM VIEKAKRLVE HKRDVVILLD SITRLGRAFN TVVPSSGKVL TGGVDANALQ
RPKRFFGAAR NIEEGGSLTI IATALIDTGS RMDEVIFEEF KGTGNSEIVL DRKIADKRVF
PAIDILKSGT RKEDLLVDKG DLAKTFVLRR ILNPMGTTDA IEFLLSKLKQ TKTNSEFFDS
MNT
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