| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2857 |
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| Symbol | |
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| ID | 4076391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3027115 |
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| End bp | 3027609 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638008186 |
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| Product | preprotein translocase subunit SecB |
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| Protein accession | YP_614851 |
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| Protein GI | 99082697 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1952] Preprotein translocase subunit SecB |
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| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.567716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.710727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAA ATGGCGCAGC CGAAGGCACT GCTCAGCAGC CGCAAGTCCA GATGAACATC
CTCGGACAGT TCATCCGCGA TCTGTCCTTT GAAAATGTGA TGGCGCAGAA AGGCGTGGGG
GGCGAAGTGC AGCCTGACGT GAACGTGCAG GTTGCTCTCG ACGCCAAAAA GCGCAGCACC
GAGAACCAGT ACGAAGTCAT CACCAAGCTG AACATCGAGT CCAAGAACAA AGCCGGTGGC
GAAGTTCTGT TTGTGCTTGA GCTGGAATAT GTCGGCATCT TCAACATCGC AGGCGTGCCC
GAGGATCAGC TTCACCCGTT CCTGCTGATC GAATGCCCGC GGATGCTGTT CCCGTTCCTG
CGTCGTATTG TTTCCGACAT CAGCCGCGAC GGTGGTTTCC CGCCGCTGAA CCTCGACAAC
ATCGATTTTG TTGCAATTTA TCGCAACGAG CTGGCCCGTC GTCAGGCAGA AGCCCCTGCC
GAAGTGACCA ACTGA
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| Protein sequence | MAENGAAEGT AQQPQVQMNI LGQFIRDLSF ENVMAQKGVG GEVQPDVNVQ VALDAKKRST
ENQYEVITKL NIESKNKAGG EVLFVLELEY VGIFNIAGVP EDQLHPFLLI ECPRMLFPFL
RRIVSDISRD GGFPPLNLDN IDFVAIYRNE LARRQAEAPA EVTN
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