Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2856 |
Symbol | |
ID | 4076390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 3026553 |
End bp | 3027050 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638008185 |
Product | FxsA cytoplasmic membrane protein |
Protein accession | YP_614850 |
Protein GI | 99082696 |
COG category | [R] General function prediction only |
COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.596074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.72438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACTTT TTCTGGCTTT TCTGCTGGTT CCAATCATTG AAATCGCCCT GTTTATACAG GTTGGCGGTC TGATTGGTCT TTGGCCAACG CTCGGGATCG TCGTTTTGAC GGCATTTTTG GGGACCTGGC TGGTGAAAAC CCAGGGTCGG CTGGCGCTTG GACAGCTGCG TGGGTCGTTT GAACGTCTTT CCGACCCGAC GGAGCCGCTC GCGCATGGCG CAATGATCCT GCTTGCCGGT GCGCTTTTGC TCACGCCTGG TTTTTTTACC GACGCTTTCG GCTTTTTGCT TCTGGTTCCC GGTTTTAGGA CCCGCGCCTT TGCCTACCTG AGAACCAAGG TGACCGTCGC CTCCTTTCAG ATGGGGCAAG ATCCGCGCCA GCATCCTCAA CACCCTCGCA AAAGTCCGCA GGGTGACGTC ATTGACGGCG ATTACGAGGA TGTAACGCCG CGTCCGCGCA ATGAGGGGCC ATCAGGTTGG GTGGAAGGTC CGAAATAA
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Protein sequence | MPLFLAFLLV PIIEIALFIQ VGGLIGLWPT LGIVVLTAFL GTWLVKTQGR LALGQLRGSF ERLSDPTEPL AHGAMILLAG ALLLTPGFFT DAFGFLLLVP GFRTRAFAYL RTKVTVASFQ MGQDPRQHPQ HPRKSPQGDV IDGDYEDVTP RPRNEGPSGW VEGPK
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