| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2840 |
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| Symbol | |
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| ID | 4076659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 3007508 |
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| End bp | 3008905 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638008169 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_614834 |
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| Protein GI | 99082680 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.916749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA CCACCCTTGG GTTGATGAGC GGCCAGAAAC GCAGCCATTG GGTGCGCCTG
CGTACTCTGA TCGTTTTGCG CTGGGTTGCA ATCATTGGCC AGGCCACCGC AATTGGTGTT
GCCCAGACCC AATATGACCT GCAGCTTTCG CTCTGGCCTT GCTATCTTGC AATCGGCGTT
TCCGCCCTGG CCAACCTGGT GGCATGGATC GTTTTTCCTG AAAACAAGCG TCTGACGGAA
TTTCAAAACT TCCTGATGGT TCTCTTTGAT CTGCTGCAGC TGTGCTTTCT GCTGTACATG
ACCGGAGGGC TCAACAATCC ATTTGCCCTT CTGGTGCTGG GGCCTGTGAC CGTTTCCGCC
TCGGTGATGC GATTGCGCTC GACGCTGATT ATCGGGACAA GCGCCGTCAT TCTCGTGACG
CTATTGGTTC CGTGGCATGT GCCGCTTCAA ACAGCCGCAG GTGAAATCCT GAAGATGCCC
GTGCTTTTTG TGTTTGGTCA CTGGTGTGCT TTGGTCATCG CGATCCTGTT CATGGGGGCC
TATTCCTATC GCATCAGTGC AGAAATTCGC TCCATGTCCG ATGCGCTTGC CGCGACGCAG
CTGGCACTCT CTCGCGAGCA GAAACTGACA GACCTCGGTG GAGTCGTTGC CGCCGCCGCG
CATGAGTTGG GCACCCCTTT GGCCACTATT AAGCTAACGA GTTCAGAACT TATCGAAGAG
CTGGACCAAA ATCCGGAACT ACAAGACGAC GCGCGCCTCA TCCGCGAACA GGCCGACCGC
TGCCGCGATA TCCTGCGCAG CATGGGACGG GCAGGCAAGG ATGACCTGCA CCTGCGCCAG
ACGCCTCTGT CAGCACTGGT ACATGAAGCG GCCGAACCAC ATTTTGAGCG TGGCAAGGAA
ATCCGACTGA GCGAGCACCC CGCCGAGGGT GACGCTCTGA ACCAGCCAAG TGTTCTGCGC
AAACCCGAGA TCATTCACGG GCTGCGCAAC CTCGTACAAA ACGCCGTTGA TTTTGCGCAG
TCAAAAGTCT GGATCGAACT GCACTGGAGC GCAGAGACCA TCACCGTGCG GATCAGCGAT
GATGGCAACG GGTTCCCGGG ACATTTGATC GGGCGTTTGG GGGACCCTTT CATGCGCCGC
CGCGCCCCCC ACGCAGAGCG CGGCAACCGC CCGGAGTACG AAGGCATGGG GCTTGGCCTG
TTTATCGCCA AGACCCTGCT GGAGCGCACA GGGGCACGGC TGAAATTCCT GAACGGTCGT
GATGTCGCCA TGTCGCCGGA CCTCTCGCCG GCACAAAGGG GCGCTCTGGT GATCGTGACA
TGGCCCCGGC GCAAGATCGA TGCCGTAAGC GGTGACACCC CTGTGCCGAC CGGAGAAAAT
ATTCCGATAC AGTTTTAA
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| Protein sequence | MSETTLGLMS GQKRSHWVRL RTLIVLRWVA IIGQATAIGV AQTQYDLQLS LWPCYLAIGV
SALANLVAWI VFPENKRLTE FQNFLMVLFD LLQLCFLLYM TGGLNNPFAL LVLGPVTVSA
SVMRLRSTLI IGTSAVILVT LLVPWHVPLQ TAAGEILKMP VLFVFGHWCA LVIAILFMGA
YSYRISAEIR SMSDALAATQ LALSREQKLT DLGGVVAAAA HELGTPLATI KLTSSELIEE
LDQNPELQDD ARLIREQADR CRDILRSMGR AGKDDLHLRQ TPLSALVHEA AEPHFERGKE
IRLSEHPAEG DALNQPSVLR KPEIIHGLRN LVQNAVDFAQ SKVWIELHWS AETITVRISD
DGNGFPGHLI GRLGDPFMRR RAPHAERGNR PEYEGMGLGL FIAKTLLERT GARLKFLNGR
DVAMSPDLSP AQRGALVIVT WPRRKIDAVS GDTPVPTGEN IPIQF
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