| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2830 |
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| Symbol | gpsA |
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| ID | 4076649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2999768 |
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| End bp | 3000730 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638008159 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_614824 |
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| Protein GI | 99082670 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCG CGGTCCTCGG CGCGGGCGCT TTTGGCACGG CATTGGCCAT CTCCCTCGCG
CGCAAGGCGC CGACAACGCT CTGGTGCCGC AGCAAAGACC ATGCAGACGA GATACGCAGC
ACGCGTGAAA ACACCCGTCG CCTGCCGGGC GCGCCCTTGC CCGATGCTCT GGCCGTCACG
TCGGATATTG CCTGTCTTGG CGCCCATGAC GTGATCCTGC TTGCTGTTCC GATGCAAAAA
ATGCGCGGTT TCCTGACCGC GCATCACGCA GCGCTTTCCG GCAAGACATT GGTAGCCTGC
TGCAAAGGCA TCGAGCTCGA CAGTGGTCTT GGCCCGGTGG CGGTTCTGCG CGACACGGTG
CCTGACGCAA CTGCAGCCCT GCTGACGGGC CCAAGTTTCG CGGCAGACAT TGCCCTCGGC
CTGCCAACCG CATTGACGCT GGCCTGCGAT CCGGATGAGA CCGGGAAAGC CCTGCAAGCC
ACCTTGTCCA CCGATAACCT GCGCCTCTAT CGCACCACCG ACCTGACCGG AGCGGAGATC
GGCGGCGCAC TGAAGAACGT CATCGCCATC GCCTGCGGAG CAGTGATCGG CGCAAGGCTC
GGTGACAGTG CCCGCGCGGC GCTCATGACA CGTGGCTATG CAGAGATGCA GCGCTTGGCA
CTGGCCCGCG GTGCCCGGCC GGAAACGCTG GCAGGGCTTT CGGGGTTTGG TGACCTCACC
CTCACATGCG GTTCGGAACT GTCGCGCAAT TTTCGCCTCG GTCTGAGCCT CGGCCGTGGA
GAGGCCTTTG ATCCCTCTAT TACGGTGGAG GGCGCAGCAA CGGCACGTGC CACCGCCAAA
ACGGCCCAAG AGATGGGATT GGAGATGCCA ATCACGCAAA CGGTAACCAA TTTGTTGGAT
CAAAGGTTGA CGATCTCCGA CGCGGCGGAT CAATTGCTTA AAAGGCCATT AAAAGAGGAA
TAA
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| Protein sequence | MSVAVLGAGA FGTALAISLA RKAPTTLWCR SKDHADEIRS TRENTRRLPG APLPDALAVT
SDIACLGAHD VILLAVPMQK MRGFLTAHHA ALSGKTLVAC CKGIELDSGL GPVAVLRDTV
PDATAALLTG PSFAADIALG LPTALTLACD PDETGKALQA TLSTDNLRLY RTTDLTGAEI
GGALKNVIAI ACGAVIGARL GDSARAALMT RGYAEMQRLA LARGARPETL AGLSGFGDLT
LTCGSELSRN FRLGLSLGRG EAFDPSITVE GAATARATAK TAQEMGLEMP ITQTVTNLLD
QRLTISDAAD QLLKRPLKEE
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