| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2824 |
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| Symbol | |
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| ID | 4076643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2993220 |
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| End bp | 2993963 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638008152 |
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| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
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| Protein accession | YP_614818 |
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| Protein GI | 99082664 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGG CTGCACGCAA AAAGAAATCA GCACCGAAAT CTCCATCCGG GCTCGCGCGC
TTTTCGCCGC GTGCGCTGTA TCGGCGACTG CGCCGTTCGG TGTTGCGGGT CGTCTTTGGC
GGCCTTGCGG CCTTCTTGGC GCTGATCCTG CTCTACTCTG TCGTGAATCC CCCGATCACC
CATACGATTT GGGTTGAGAA ACGCCGCTTG GGCGATGTGG ATCGTGAATG GGTGCCGATC
GAGCATATCT CGCCCCACAT GGCCCGTTCA GTGGTCGCCG CAGAGGATGC AAGATTCTGT
GAACACTGGG GTTTTGACGT TCATGCGATT CGCAGCGCGC TGGAATCGGG CGCCAATCGC
GGAGCCTCCA CCCTAACGCA ACAGGTGGTG AAAAACGTCT TTCTCTGGCA GGGGCGTAGC
TGGTTTCGCA AGGCGCTCGA GACCTTTATC ACGCCGGTCG TCGAGGCCAC CTGGAGCAAG
GAACGCATTG TCGAGGTCTA CCTGAACGTT GCCGAGATGG GCGAGGGCAT CTTTGGCGCC
GATGCAGCCG CGCGGCATTA TTTTGGCGTG GGCCCAGATC AGCTCAGCGC ACAGCAAGCC
GCCCTGATCG CAGCCCTTTT GCCCAACCCA AAGGAGCGCT CCGCCGCCGA TCCCGGCAAT
TTCATGCGCA AAAGAGCGCG GCAGATCATG GATGGAGCCG CCACAATTGA ACGCGACGGA
CGCTCTGCCT GTTTCGAGCA TTGA
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| Protein sequence | MAKAARKKKS APKSPSGLAR FSPRALYRRL RRSVLRVVFG GLAAFLALIL LYSVVNPPIT
HTIWVEKRRL GDVDREWVPI EHISPHMARS VVAAEDARFC EHWGFDVHAI RSALESGANR
GASTLTQQVV KNVFLWQGRS WFRKALETFI TPVVEATWSK ERIVEVYLNV AEMGEGIFGA
DAAARHYFGV GPDQLSAQQA ALIAALLPNP KERSAADPGN FMRKRARQIM DGAATIERDG
RSACFEH
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