| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2823 |
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| Symbol | |
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| ID | 4076642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2988543 |
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| End bp | 2993075 |
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| Gene Length | 4533 bp |
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| Protein Length | 1510 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638008151 |
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| Product | glutamate synthase (NADPH) large subunit |
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| Protein accession | YP_614817 |
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| Protein GI | 99082663 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAT ATGATGAGAA CTGGGTGCGC GCCGAAGAAG CAAAGCGCAA GTGGATGGCT
GAAAACGGTC TCTACGCCGA GGAGGAAGAG CACTCTTCCT GCGGTGTGGG TCTCGTGGTC
TCCGTGGATG GTTCCAAGAG CCGCAAAGTG GTTGATGCAG GCATCGACGC GCTCAAGGCA
ATCTGGCACC GTGGTGCTGT GGATGCAGAC GGCAAAACCG GCGATGGCGC AGGGATCCAC
GTTCAGATCC CGGTTCCCTT CTTCTGGGAT CAAGTCAAAC GCACTGGCCA CAATCCTCGC
GAGGATGAAC TCCTGGCGGT GGGTCAGGTA TTCCTACCCC GTACCGACTT TGGCGCGCAG
GAGACCTGCC GGACTATCGT CGAAACCGAA GTCCTTCGCA TGGGCTACTA CATCTACGGC
TGGCGTCATG TGCCGGTGGA TGTGACCTGT CTCGGAGAAA AAGCAAATGC GACCCGCCCA
GAGATCGAGC AGATCTTGAT CTCCAACTCC AAGGGCGTGG ATGAGGAAAC CTTCGAGCGC
GAGCTCTATG TGATCCGTCG CCGGATCGAG AAAGCCGCCG CCGCCGCACA AGTGGGTGGA
CTCTATATTG CGTCGCTCTC CTGCCGGTCG ATTATCTACA AAGGCATGAT GCTCGCCGAA
CAGGTCGCGG TTTTCTATCC CGACCTGATG GATGAGCGCT TTGAGAGCGC CTTTGCGATC
TATCACCAGC GGTACTCGAC CAACACCTTC CCGCAGTGGT GGCTGGCGCA ACCGTTCCGC
ATGCTGGCGC ACAACGGCGA AATCAACACC CTCAAGGGCA ACGTCAACTG GATGAAGAGC
CATGAAATCC GCATGGCCTC TTCGACCTTT GGCGACCACG CCGAAGACAT CAAACCCATC
GTGGCGTCGG GGTCCTCCGA CTCTGCCGCG CTGGATTCGG TGTTCGAGGT TCTGGTGCGC
GCAGGTCGCT CCGCACCGAT GGCGAAAACC ATGCTGGTGC CGGAGAGCTG GTCCAAACAG
GCCGAGGAAC TGCCGCAGGC CTGGCGCGAC ATGTACTCCT ATTGCAACGC CGTGATGGAG
CCCTGGGATG GTCCGGCCGC ACTTGCGATG ACCGACGGTC GCTGGGTGTG TGCAGGTCTT
GATCGCAACG GCCTGCGCCC GATGCGCTAT GTGGTGACTG GCGATGGTCT GGTGATCGCG
GGTTCAGAGG CCGGTATGGT TCCGATCGAC GAAGCCTCCG TTGTGGAAAA AGGCGCGCTA
GGTCCGGGTC AGATGCTGGC CGTGGATATG GCCAAAGGCC AGCTATATCA CGACGTCGAA
ATCAAGGACA AACTCGCCCG CGCCCTGCCC TTTGGCGAGT GGGTTGAGAA GGTCACCGAT
CTCGATGAGG TTCTGGGTGG CGTGCAGGAA ACGCCGCTGT TTTCCGGTGA AGAACTGCGC
CGCCGTCAGG TCGCCGCTGG CTACACCATT GAAGAACTGG AGCAGATCCT TGCGCCCATG
GCCGAGGACG GCAAAGAAAG CCTTGCTTCC ATGGGCGATG ACACGCCCTC TGCGGTTCTG
TCCAAACAGT ATCGCCCGCT GAGCCATTTC TTCCGCCAGA ACTTCAGCCA GGTGACCAAC
CCGCCGATCG ACAGCTTGCG CGAATTCCGC GTCATGAGCC TCAAAACCCG GTTCGGGAAC
CTCAAGAACG TGCTGGATGA GGATAGCTCC CAGACCGAAA TCGTTGTCCT CGAGAGCCCC
TTCGTCGGCA ATTCCCAATG GGATAAGCTG GTCGAGAACC TTGGGTCCAA ACTGGCCGAA
ATCGACTGCA GCTTTGCCCC CGGTCGGGGC GCCCTGAACG CAGCTCTGGC CCGCATTCGT
GCCGAAGCCG AAGAAGCCGT GCGCTCTGGC GCAGGTCACA TCGTTTTGAC CGACCAGCAC
TCCGGCGCGG ACAAAGTTGC GATGCCGATG ATCCTCGCGA CATCTGCGGT GCACTCGCAT
CTGACCCGCC AGGGCCTTCG GACCTTCTGC TCGCTGAACG TGCGTTCTGC CGAATGTATC
GACCCCCATT ACTTTGCAGT GCTGATCGGC TGTGGCGCAA CGGTGGTGAA CGCCTACCTG
GCCGAAGATT CGCTCGCAGA CCGTATCGAG CGCGGCCTTC TCGACGGCAG CCTCACCGAA
AACGTCGCGC GTTACCGCGA GGCGATTGAC CAAGGTCTGC TGAAAATCAT GGCGAAGATG
GGGATCTCGG TGATTTCCTC CTATCGCGGG GGTCTGAACT TTGAGGCTGT TGGCCTCTCA
CGCGCGATGG TCGCCGAGTA CTTCCCCGGC ATGACCTCGC GGATCTCCGG CATCGGTGTG
CACGGCATTC AGGTGAAGGC CGAAGAAATC CACGCAAAAG GCTGGAACAC TCAGGAAAAC
GTGCTGCCCA TCGGTGGCTT CTACAAGGCG CGCAAGTCCG GCGAGACCCA CGCCTGGGAA
GCAACCTCGA TGCATATGAT GCAGATGGCC TGCAACAAGG CCTCGTTCGA GCTGTGGAAG
CAGTATTCGG CCAAGATGCA ATCGAACCCG CCGATCCATT TGCGCGACCT TCTGGACATC
AAGCCGCTCG GCAAACCTGT CCCGCTCGAG GAGGTGGAAA GCATCACCGC AATCCGCAAG
CGCTTTGTGA CACCGGGCAT GTCTCTGGGT GCGCTCTCTC CGGAGGCACA TAAGACGCTG
AACGTGGCGA TGAACCGGAT CGGTGCCAAA TCCGACTCTG GCGAAGGCGG TGAAGATCCG
GCGCATTTCG TGCCAGAGCC CAACGGCGAC AACCCCTCTG CGAAGATCAA GCAGGTGGCG
TCGGGCCGGT TTGGTGTGAC CGCCGAATAC CTGAACCAAT GCGAAGAGCT GGAGATCAAG
GTCGCGCAGG GTGCAAAGCC CGGCGAGGGT GGCCAGTTGC CGGGCATGAA AGTCACCGAC
CTGATTGCGC GCCTGCGCCA TTCGACCAAG GGCGTGACCC TGATTTCCCC GCCGCCGCAC
CACGATATCT ACTCGATCGA GGATCTGGCG CAGCTCATCT ACGACCTGAA GCAGATCAAC
CCGCGCTGCA AAGTGACGGT GAAGCTGGTG GCCTCTTCTG GTGTTGGCAC CATTGCCGCG
GGCGTTGCCA AGGCCAAAGC CGACATCATC CTGATCTCGG GCCACAACGG CGGCACCGGG
GCCTCTCCCG CGACCTCGAT CAAATACTGC GGTCTGCCAT GGGAGATGGG TCTGACCGAG
GCGCATCAGG TTCTGGCGAT GAACAATCTG CGCGACCGCG TCACCCTGCG GACCGACGGC
GGCCTGCGGA CCGGACGTGA CATCGTCATG GCCGCGATGA TGGGGGCCGA GGAATACGGC
ATTGGCACCG CCGCGCTGAT CGCCATGGGC TGTATCATGG TGCGCCAATG CCAGTCGAAC
ACCTGCCCGG TGGGCGTCTG CACTCAGGAC GAGGCCCTGC GTGGCAAGTT CACCGGCAAC
GCCGACAAAG TCGTGAACCT CATCACCTTC TACGCACAGG AAGTGCGCGA GATCCTTGCT
TCCATCGGGG CACGCAGCCT CGATGAGGTG ATCGGTCGCG CGGATCTTCT GGCGCAGGTA
TCGCGTGGCT CCGCCCACCT TGATGACCTC GACCTGAACC CGCTCCTGAT CACCGTCGAT
GGCTCCGCCA GCATCGTTTA CAATCGCGAC AAAGATCGCA ACGCGGTGCC GGACACGCTG
GATGCCGAGA TTGTGCGTGA CGCTGCCCGG TTCCTGAAGG ACGGTGAGAA AATGCAGCTC
TCTTACGCGG TGCAGAACAC ACATCGCACC GTGGGCACGC GCACCTCGAG CCATATCGTG
CAGAACTTTG GCATGCGCAA CACGCTGCAG CCGGACCACC TGACCGTGAA ACTTCAGGGT
TCGGCAGGTC AGTCGCTCGG CGCCTTTGCG GCACCTGGCT TGAAACTCGA AGTTTCAGGC
GATGCCAACG ACTATGTCGG TAAAGGCCTC TCGGGCGGCA CGATCGTGGT ACGTCCGCCG
ATGGCATCGC CGCTCAACGC CGCTGAAAAC ACCATCGTCG GCAATACCGT GCTTTATGGT
GCGACCGATG GTTACCTCTT TGCAGCGGGC CGCGCTGGTG AACGCTTTGC GGTGCGCAAC
TCCGGCGCCA AGGTCGTCAT CGAGGGCTGC GGCACCAACG GCTGTGAATA TATGACCGGC
GGTGTCGCGG TGATCCTCGG CAGCATCGGA GCAAACTTCG GTGCCGGGAT GACTGGCGGG
ATGGCCTATC TCTATGATCC TGATGGGAAT GCCGAGACCC TGATGAACAT GGAAAGCATC
GTCACCTGCC CGGTGACAGT GGACCATTGG GAAGCGCAGC TCAAAGATCT GATCGAACGC
CATGTCGCAG AAACCGGAAG CCGCAAGGCT GCCGAAATCC TGCAGCACTG GGACAGCGAA
AAAACCCATT TCCTTCAGGT CTGCCCAAAG GAAATGCTGA ACAAGCTGCC GCACCCCATT
TCGGTCGAGA CCTCGGCGAT CCCGGCTGAA TAA
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| Protein sequence | MTKYDENWVR AEEAKRKWMA ENGLYAEEEE HSSCGVGLVV SVDGSKSRKV VDAGIDALKA
IWHRGAVDAD GKTGDGAGIH VQIPVPFFWD QVKRTGHNPR EDELLAVGQV FLPRTDFGAQ
ETCRTIVETE VLRMGYYIYG WRHVPVDVTC LGEKANATRP EIEQILISNS KGVDEETFER
ELYVIRRRIE KAAAAAQVGG LYIASLSCRS IIYKGMMLAE QVAVFYPDLM DERFESAFAI
YHQRYSTNTF PQWWLAQPFR MLAHNGEINT LKGNVNWMKS HEIRMASSTF GDHAEDIKPI
VASGSSDSAA LDSVFEVLVR AGRSAPMAKT MLVPESWSKQ AEELPQAWRD MYSYCNAVME
PWDGPAALAM TDGRWVCAGL DRNGLRPMRY VVTGDGLVIA GSEAGMVPID EASVVEKGAL
GPGQMLAVDM AKGQLYHDVE IKDKLARALP FGEWVEKVTD LDEVLGGVQE TPLFSGEELR
RRQVAAGYTI EELEQILAPM AEDGKESLAS MGDDTPSAVL SKQYRPLSHF FRQNFSQVTN
PPIDSLREFR VMSLKTRFGN LKNVLDEDSS QTEIVVLESP FVGNSQWDKL VENLGSKLAE
IDCSFAPGRG ALNAALARIR AEAEEAVRSG AGHIVLTDQH SGADKVAMPM ILATSAVHSH
LTRQGLRTFC SLNVRSAECI DPHYFAVLIG CGATVVNAYL AEDSLADRIE RGLLDGSLTE
NVARYREAID QGLLKIMAKM GISVISSYRG GLNFEAVGLS RAMVAEYFPG MTSRISGIGV
HGIQVKAEEI HAKGWNTQEN VLPIGGFYKA RKSGETHAWE ATSMHMMQMA CNKASFELWK
QYSAKMQSNP PIHLRDLLDI KPLGKPVPLE EVESITAIRK RFVTPGMSLG ALSPEAHKTL
NVAMNRIGAK SDSGEGGEDP AHFVPEPNGD NPSAKIKQVA SGRFGVTAEY LNQCEELEIK
VAQGAKPGEG GQLPGMKVTD LIARLRHSTK GVTLISPPPH HDIYSIEDLA QLIYDLKQIN
PRCKVTVKLV ASSGVGTIAA GVAKAKADII LISGHNGGTG ASPATSIKYC GLPWEMGLTE
AHQVLAMNNL RDRVTLRTDG GLRTGRDIVM AAMMGAEEYG IGTAALIAMG CIMVRQCQSN
TCPVGVCTQD EALRGKFTGN ADKVVNLITF YAQEVREILA SIGARSLDEV IGRADLLAQV
SRGSAHLDDL DLNPLLITVD GSASIVYNRD KDRNAVPDTL DAEIVRDAAR FLKDGEKMQL
SYAVQNTHRT VGTRTSSHIV QNFGMRNTLQ PDHLTVKLQG SAGQSLGAFA APGLKLEVSG
DANDYVGKGL SGGTIVVRPP MASPLNAAEN TIVGNTVLYG ATDGYLFAAG RAGERFAVRN
SGAKVVIEGC GTNGCEYMTG GVAVILGSIG ANFGAGMTGG MAYLYDPDGN AETLMNMESI
VTCPVTVDHW EAQLKDLIER HVAETGSRKA AEILQHWDSE KTHFLQVCPK EMLNKLPHPI
SVETSAIPAE
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