| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2822 |
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| Symbol | |
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| ID | 4076641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2987026 |
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| End bp | 2988468 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638008150 |
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| Product | putative oxidoreductase |
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| Protein accession | YP_614816 |
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| Protein GI | 99082662 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit
[TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.289366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.925781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAAGC AACCGATGCT AAAGTTCGTG AAGATCGATC GCGACATGCC CGAAAAACGG
GACGCCGAGA CGCGCAGAGA AGACTTCGAC GAGATCTATG CTGAATTTGC GGCGGTAAAG
GCAGAAGAGC AGGCCAGCCG GTGCAGCCAG TGCGGCGTGC CATATTGCCA GTCGCATTGT
CCGCTCCACA ACAATATTCC GGATTGGCTG CGTCTGACGG CGACCGGGCG CCTGGAAGAG
GCCTATGCCA CATCGCAGGC GACGAATACC TTCCCTGAAA TCTGTGGCCG CATCTGCCCG
CAGGACCGTC TCTGTGAAGG CAACTGCGTG ATTGAACAGT CCGGCCACGG CACCGTAACC
ATTGGTGCAG TCGAGAAATA CATCACCGAT ACCGCGTGGG ACAAAGGCTG GGTCAAGCCC
AACGCCCCGA TCGAAGAACG TGCGGAATCC GTCGGTATCA TCGGTGCGGG CCCCGGCGGC
CTTGCAGCAG CTGACATGCT GCGCAAGGCA GGCGTGCAGG TCACGGTATA TGACCGCTAT
GACCGCGCTG GCGGGCTGCT GACCTACGGC ATCCCGGGCT TCAAGCTCGA AAAAGAAGTT
GTCATGCGCC GCAATCAACT GCTGGCCGAC GGTGGCGTCA CTTTTGTGAT GAACTGCAAT
ATCGGCGAGG ACATATCTTT TGACGAAATC CGCGCCAAGC ATGACGCAGT GATCATTGCA
ACCGGCGTGT ACAAATCCCG CGATCTGAAC ATGCCGGGCT CTGGTGCCAA AGGGATCGTG
AAGGCCATCG ACTTCCTCAC AGCCTCCAAC CGGGTGGCGA ACTTTGGTGA CACCGTACCA
GAGTATGAGG ACGGTACCTT CAACGCCACG GGCAAGAAGG TTGTCGTGAT CGGCGGTGGC
GACACCGCGA TGGACTGCGT GCGCACCTCG GTGCGTCAGG GCGCCGAGTC GGTGAAATGC
CTCTATCGTC GCGACCGTGC AAACATGCCC GGCTCGCAAC GCGAAACCCA GAATGCCGAA
GAAGAAGGCG TCGTCTTTGA ATGGCTCTCC GCCCCAAAAG GCTTCACCGA TGCAGACGGC
AAGGTCTCGG GCGTCATGGT GCAGAAAATG CGTCTCGGCC AACCCGATGC CTCTGGCCGT
CAGGCCCCCG AGGTCATCGA GGGTGCGGAC TATGTCGAAG AAGCAGACCT CGTCATCAAA
GCGCTGGGAT TCGAACCCGA AGACCTGCCG ACGCTCTGGG GCCAGCCGAA CCTGCCGGTC
ACCCGCTGGG GCACCATCAA GGCAGAGTTC AAAACCGGCG CGACCAATCT CGATGGGGTT
TACGCCGTTG GGGACATTGT GCGCGGCGCG TCGCTGGTGG TCTGGGCGAT CAAGGATGGT
CGCGACTGTG CAGAAGCGAT CATTGAGCGT TTCAACAACA AGGCCGCCGT CGCCGCCGAG
TAA
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| Protein sequence | MAKQPMLKFV KIDRDMPEKR DAETRREDFD EIYAEFAAVK AEEQASRCSQ CGVPYCQSHC
PLHNNIPDWL RLTATGRLEE AYATSQATNT FPEICGRICP QDRLCEGNCV IEQSGHGTVT
IGAVEKYITD TAWDKGWVKP NAPIEERAES VGIIGAGPGG LAAADMLRKA GVQVTVYDRY
DRAGGLLTYG IPGFKLEKEV VMRRNQLLAD GGVTFVMNCN IGEDISFDEI RAKHDAVIIA
TGVYKSRDLN MPGSGAKGIV KAIDFLTASN RVANFGDTVP EYEDGTFNAT GKKVVVIGGG
DTAMDCVRTS VRQGAESVKC LYRRDRANMP GSQRETQNAE EEGVVFEWLS APKGFTDADG
KVSGVMVQKM RLGQPDASGR QAPEVIEGAD YVEEADLVIK ALGFEPEDLP TLWGQPNLPV
TRWGTIKAEF KTGATNLDGV YAVGDIVRGA SLVVWAIKDG RDCAEAIIER FNNKAAVAAE
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