| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2814 |
|---|
| Symbol | |
|---|
| ID | 4076633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2977860 |
|---|
| End bp | 2978420 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638008140 |
|---|
| Product | ubiquinol-cytochrome c reductase, iron-sulfur subunit |
|---|
| Protein accession | YP_614808 |
|---|
| Protein GI | 99082654 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0723] Rieske Fe-S protein |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.255462 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCCACG CAGAAGACCA CGAAGGAACC CGGAGAGATT TCCTCTACTA CGCCACCGCT
GGCGCAGGGG CAGTCACCGC GGGTGCCGCC GTTTGGCCAC TGGTCAACCA GATGAATCCC
TCGGCTGACG TTCAGGCCCT GTCCTCCATC CTTGTGGACA TTTCAGGCGT CGACGTCGGC
ACGCAGATCT CTGTTATGTT CCTTGGTAAG CCGGTGTTCA TTCGCCGCCG CACACAGGAA
GAAATTGACG AAGCACGCGC TGTCGAGATG GCAGAGCTGA TCGACGCCTC TTCGGAGAAC
CCCAACAAGC CGGGGACCGA TGCTTCGGAT GAAAACCGTA CTCTTGATGA GAATGGTGAA
TGGCTGGTGA TGATGGGTGT CTGTACCCAC CTCGGCTGTG TTCCGCTCGG CGACGGTGCC
GGCGAATTCA ACGGCTGGTT CTGCCCGTGC CACGGCTCGC ACTACGATAC CGCAGGTCGT
ATCCGCAAAG GCCCCGCACC GCAGAACCTT CACATCCCGG TGGCTGAGTT CACCGACGAA
AACACCATCA AGCTGGGATA A
|
|---|
| Protein sequence | MSHAEDHEGT RRDFLYYATA GAGAVTAGAA VWPLVNQMNP SADVQALSSI LVDISGVDVG
TQISVMFLGK PVFIRRRTQE EIDEARAVEM AELIDASSEN PNKPGTDASD ENRTLDENGE
WLVMMGVCTH LGCVPLGDGA GEFNGWFCPC HGSHYDTAGR IRKGPAPQNL HIPVAEFTDE
NTIKLG
|
|---|
| |