| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2808 |
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| Symbol | |
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| ID | 4076576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2970802 |
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| End bp | 2972226 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638008133 |
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| Product | hypothetical protein |
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| Protein accession | YP_614802 |
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| Protein GI | 99082648 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.711174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.599029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTCT TGAGTCGATA TTGCCTTGTT GCGAGCGCCT CCTCCCTTGC CATTGCGGCG
TCTGCTCAGG AACGCGACCC GATGCTCTTA TACGAGCGCG ATGCGTTGAC AGTGCGTGGG
CATTTTCAGG CGGGATTGAA TGCAGTGGCA GAGGACAATC TCTTTTGGGA TCTCGCTGCC
ACCACCGCGC CGGGTAGCGG GTTTGATCCC GATACCCGCT GGCTTGAAAG CTACATCAAG
CCGGGCATCA GCTTTGAATA TCGGCTTGAT ACCGGCGCGA CTCTCTATGG CAAGCTCTCC
GGCGTGGCGT CCTACACATG GGGGAAGGAT GCTTTTGACT ACGGCGATAC TGGCGCCACC
ACACTGGAGG AGGCCTACAT CGCGATTCGT GGCAGGCTTG GAACGGATGC GACGTATGAT
CTGTCTCTTG GTGCGCGCGA GCTCACGCTG GGCACAGGCA TGCTGATTGC CAATGGCGCG
ACCAGTGGTT TTGAACGTGG TGCGTTGAAA TTTGGGCCCC GCAAGGCCTG GGAAGGGGCG
GCGATTGGCC GGTTCACATT GGGGCAGGTC TCGGGGACGG CATTCTACCT TGATCCGAAT
GAACTGCCCT CGACAGATGG AAACAACAAT CTGGCGGGGG TTGATCTGCG GTACGACGCC
CCGGCAGGTG GCTATCTGGG CGTCACCTAT GTGGATGTTC TGAACTCCGA ATCGTCTTAT
CCGAAAGCAG CCCCCGGTGG TGTCGGCGCC CCGAGCATCC TTCCCGGGGG GCGCGAAGGA
ACTCGTACGC TTGGCCTGTA TGGGCGCACA AATCCATTTG ATAACGGGCT GGAGAATTGG
ACGTTCACCG GAGAGGTCGC CTATCAATGG AATGACCGCA TCGACCTGGA GGCTTGGGCC
GGACGGGTCA CGGCGGGCTA CACATTCGAG GGTCTGGCCT GGTCCCCGAA TCTCACCATT
GGATATCAGA GCTTTTCCGG AGACGATCCA AACACCACAA AACTCGAGCG GTTTGATCCG
CTCTATTATC AAGGCAGCCC AAGCGCCTGG GCCACGGGAT CAAAATCCGC TTCCACTTTC
ATCAACTCGA ATGTGAACGC GCTAACTCTG GCCTTGCGCC TTCAACCGTC ACGACAGGAC
ACCTGGACGC TACGCTATGC GCACATCCGG GCGAATGAGC TCAACAGCCC CGTCCAATTC
GGGCAGGCAA CGCGCGTCGA TCTGAACGGG AATGTCGTGT CGGGGGTCAC GGATAGTCAT
CTCGCCGATG ACCTGTTTCT CGAATACAGC AGAATTATCA ACCGCAATAC GTTTCTGACT
GCTGGGATCT CTGTGTCCTT TCCCGGTGCT GGCATCGACA ATGTCATCGG TGCAACTGCG
GACCCTTGGA CAGGAGGTTT CATCAATGTC GTCGTCAACT TCTAA
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| Protein sequence | MRVLSRYCLV ASASSLAIAA SAQERDPMLL YERDALTVRG HFQAGLNAVA EDNLFWDLAA
TTAPGSGFDP DTRWLESYIK PGISFEYRLD TGATLYGKLS GVASYTWGKD AFDYGDTGAT
TLEEAYIAIR GRLGTDATYD LSLGARELTL GTGMLIANGA TSGFERGALK FGPRKAWEGA
AIGRFTLGQV SGTAFYLDPN ELPSTDGNNN LAGVDLRYDA PAGGYLGVTY VDVLNSESSY
PKAAPGGVGA PSILPGGREG TRTLGLYGRT NPFDNGLENW TFTGEVAYQW NDRIDLEAWA
GRVTAGYTFE GLAWSPNLTI GYQSFSGDDP NTTKLERFDP LYYQGSPSAW ATGSKSASTF
INSNVNALTL ALRLQPSRQD TWTLRYAHIR ANELNSPVQF GQATRVDLNG NVVSGVTDSH
LADDLFLEYS RIINRNTFLT AGISVSFPGA GIDNVIGATA DPWTGGFINV VVNF
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