| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2807 |
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| Symbol | |
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| ID | 4076575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2969475 |
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| End bp | 2970821 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638008132 |
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| Product | 6-aminohexanoate-dimer hydrolase |
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| Protein accession | YP_614801 |
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| Protein GI | 99082647 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0455053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.617954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCGT CAACTTCTAA TTTCTTTGCA GCAACTCTGG CGGCGGCGGT TGCGCTTGTC
GTCTCATCGC AGGCGGGCGC GCAATCCGCA CCGCTGTCTG CGCAAGAATC CGACCCCAAT
GTCATGGGCT GGATGCAAGG CTTTCCACCG CCCGCTGACA AGATCATTAC CCAACCTGAC
AGCGTCTACT TCAGCTTTCC AAGACTGCGC TGGTCGGTCT GCCATTTGCG CGAGTTCTTA
CCGACCGAGG AGATCAGTCG CGGACTCAGC GATCCGGTGC CGTTGACCTA CCCCTCCGCG
TCAGAGTTTG CCGAGCTGCG AGCGGAGATC GATGCGGTCA CCTTCATGCC TCAGAACAGT
GATGCAGAGA TGACGTGGGA GCAGTCGCTT TACGCGAATT ACACCGATGG CATGCTGATC
CTGCATAAAG GCGAAGTTGT CTATGAGCGC TATTTTGGTT GCCTTGAAGA GGGCGGCAAA
CACGCGATCA TGTCCATGAC CAAGTCTTTT ACCGGTCTTG TGGCGGAAAT CATGGTTGTT
GAGGGGCTGC TAGATGACAC AGCATTGGTG CGTGACATCA TCCCAGAGAT CGGCGACAGC
GCCTTTGCGA CTGCGACCGT GCGTCAGGTG ATGGATATGA CAACCGGGGT ACAGTACTCC
GAGGACTACT CGGACCCCAA CGCGGATATC TGGCTCTATT CCAAAGCGGC TAGCCCGCTC
CCAAAACCAG AGGGGTATGT AGGGCCGAAC GGGTATTGGG AATACCTGCA GCAGGTGGCG
CCAGAGGGCA ATCACGGGGA CGCGTTTCAC TATAAAACCA TCAACTCCGA TATGCTGGGC
TGGATCATCA GTCGCGTGTC GGGGCAGTCG GTCACCGATA TTGTGTCCGA TCGTCTCTGG
CGCCGGATGG GGGTGGAGCA GGATGCCTAT CAAACCGTGG ACGCCAAGGG TGTTCCATTC
GCTGGTGGCG GCATCACCGC GGGTCTACGT GATCTTGGGC GATTGGGACA GCTGATGCTG
AACGAAGGGG AGCTCAATGG GCAGCGCCTG TTCCCCACCG AGGTGGTTGC CAAGATCAGC
GCCGGTGGCG ACCGGTCCAA GTTCGGCGAT GGTTTTCCCA CCTTTGGTGC TGGCAGCTAC
ACCAGCCAGT GGTGGGTACT CCACAATGCG CATGGCGCTT ATGCGGCGCG CGGTGTTCAT
GGTCAGACAA TCTATGTGGA TCCCACGGCC GAAATGGTGC TGGTACGGCT TTCCTCATTT
CCCAAAGCGC AGAACGGATT TATCGACCCG ACCTCGCTTC CTGCCTATCA AGCTGTCGCA
GAGCATTTGA TGGCAACACG CCCCTAA
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| Protein sequence | MSSSTSNFFA ATLAAAVALV VSSQAGAQSA PLSAQESDPN VMGWMQGFPP PADKIITQPD
SVYFSFPRLR WSVCHLREFL PTEEISRGLS DPVPLTYPSA SEFAELRAEI DAVTFMPQNS
DAEMTWEQSL YANYTDGMLI LHKGEVVYER YFGCLEEGGK HAIMSMTKSF TGLVAEIMVV
EGLLDDTALV RDIIPEIGDS AFATATVRQV MDMTTGVQYS EDYSDPNADI WLYSKAASPL
PKPEGYVGPN GYWEYLQQVA PEGNHGDAFH YKTINSDMLG WIISRVSGQS VTDIVSDRLW
RRMGVEQDAY QTVDAKGVPF AGGGITAGLR DLGRLGQLML NEGELNGQRL FPTEVVAKIS
AGGDRSKFGD GFPTFGAGSY TSQWWVLHNA HGAYAARGVH GQTIYVDPTA EMVLVRLSSF
PKAQNGFIDP TSLPAYQAVA EHLMATRP
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