| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2792 |
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| Symbol | |
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| ID | 4076560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2953530 |
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| End bp | 2954453 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638008117 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_614786 |
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| Protein GI | 99082632 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.303963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAATA TCACACTCAA GCAGCTCCGG TACTTCGAGG CGCTCACCCG GCATGGGCAT
TTTGGACGCG CGGCGGATGC CTGTGCGATC TCGCAACCTG CCTTGTCAAT CCAAATCAAA
GAGTTGGAGG AGACGCTTGG CATCGTTTTG TTTGAACGCA GTGCGCGCCA TGTGCGCCTG
ACAGGTTTCG GACAGGACTT TGCAGAGCGC GCACGAGAAA TCCTGCGGTC TGTTGATGAG
TTGGGCGATC TGGCACGCGT CGCACAGGAC CGGATGGTCG GTCGGCTCCG CATTGGGGTT
ATCCCCACGG TTGCGCCCTA TCTACTGCCT ACGCTGATCC AGCGTCTGAA CGCCCGGCAT
GACGGACTTG ATGTCCATAT CCGCGAAACC CTGACGCAGC GCCTGATCAC GGAACTTTTG
GAAGGGCGGC TGGACACAGC GATTGTCGCG CTCCCGGTGT CAGAATCGGG ATTGGTCGAA
ACCGCGCTGT TTGAAGAGAA ATTCGTCTTG GTCCGTCAGG CTTCGGATGC GGGCGCGCCG
GTTCCCTCGC CCGAAGGCAT GCGCGAAATG AAGCTCTTGT TGCTGGAAGA AGGCCATTGT
TTTCGCGATC AGGCCCTGTC CTTTTGCAGC CTGCGTCCGG CGCTGCCGCG TGACGGGCTG
GACGGCAGTT CATTGTCGAC ACTGGTACAG ATGGTGGGCG CCGGTATCGG CGTTACGATC
ATCCCCGAGA TGGCCGTCGC TGTGGAGACA CGCTCTGCAC CCGTCTCTCT TGCTCGTTTC
CCAGGAGATG AGCCAGGGCG CACGATCGGG ATGGTCTGGC GCAAGACCAG CCCCCTCGCG
CCACAACTAC AAGACATCGC AGAGGTGGTG CGAGAGGCTG CCGAAGCGCT GGCACGCCGA
AACAGAGATG TCTTACCGCT CTAG
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| Protein sequence | MINITLKQLR YFEALTRHGH FGRAADACAI SQPALSIQIK ELEETLGIVL FERSARHVRL
TGFGQDFAER AREILRSVDE LGDLARVAQD RMVGRLRIGV IPTVAPYLLP TLIQRLNARH
DGLDVHIRET LTQRLITELL EGRLDTAIVA LPVSESGLVE TALFEEKFVL VRQASDAGAP
VPSPEGMREM KLLLLEEGHC FRDQALSFCS LRPALPRDGL DGSSLSTLVQ MVGAGIGVTI
IPEMAVAVET RSAPVSLARF PGDEPGRTIG MVWRKTSPLA PQLQDIAEVV REAAEALARR
NRDVLPL
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