Gene TM1040_2791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2791 
Symbol 
ID4076559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2951135 
End bp2953351 
Gene Length2217 bp 
Protein Length738 aa 
Translation table11 
GC content61% 
IMG OID638008116 
Productcatalase/peroxidase HPI 
Protein accessionYP_614785 
Protein GI99082631 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0376] Catalase (peroxidase I) 
TIGRFAM ID[TIGR00198] catalase/peroxidase HPI 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.258603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGAC AAGATATTGG CGCAGGCGGC GGCTGCCCCT TTTCGGGCGC GAACACCAAC 
AAGGGTCGCA GATCAAACCG TGACTGGTGG CCGAACCAGC TCAACCTCTC GATCCTGCAT
CAACATCAGG CGCGCCAGAA TCCGCTCGGC GAGACGTTCA ACTATGCCGA GGCGTTCAAG
AGCCTCGATC TGGACGCTGT GAAGAAAGAC CTGATCGCGC TGATGACCGA CAGTCAGGAT
TGGTGGCCAG CGGACTACGG TCACTATGGC GGGCTTATGA TCCGCATGGC TTGGCATTCG
GCAGGGACCT ACCGGACCGC AGACGGTCGT GGCGGCGCCT CGACGGGCAC GCAGCGTTTC
GCGCCACTGA ACTCCTGGCC GGACAACGGC AACCTCGACA AGGCGCGCAT GCTGCTGTGG
CCGATCAAAA AGAAGTACGG CAATGCGCTC TCTTGGGCCG ATCTGATGAT CCTCGCGGGC
AACTGCGCGA TCGAGTCCAT GGGGCTGAAG CCCTTTGGCT TTGGTGGTGG CCGTGCCGAC
GTTTGGGAGC CCGAGGAAGA CATTTACTGG GGGGCTGAAG ACGAATGGCT TGCCACCTCG
GATCACGCGC AGGCCCGCTA TTCCGGTGAT CGCGTGCTGG AGGACCCGCT GGCTGCCGTG
CAGATGGGTC TCATTTACGT GAATCCCGAA GGGCCTGACG GGAACCCGGA CCCCATCGCA
TCCGGCCGTG ACATTCGCGA GACCTTTGCC CGGATGGCGA TGAACGACGA GGAAACCGTG
GCGCTGACCG CCGGGGGGCA CACCTTTGGC AAGGCGCATG GCAACGGCCC GGTGGACGCA
GTCGGCCCCG AACCAGAAGC TGCGCCCATC GAGGCGATGG GTCAGGGCTG GCTCTCTTCG
CACAAATCCG GCAAGGGCGT GGACACTATT ACCTCTGGGA TCGAGGGCGC TTGGACGCCG
AATCCGATCC AGTGGGATAT GGGTTATTTT GATGTCCTGT TCGGCTATGA TTGGGAACTG
ACCAAATCCC CGGCGGGTGC TTGGATCTGG CATGCGAAGG ACCTCAAAGA GGATGACCAC
GCCCCCGAGG TGGACGGCTC CGGCAAAAAG GTCCCGATCA TGATGACCAC CGCCGATATG
GCGATGAAGA TGGACCCGAT CTATGGGCCG ATCTCCAAGC GGTTCCATGA AAACCCGGAG
GAGTTCGCCG AGGCCTTCAA GCGCGCATGG TTCAAGCTGA CGCACCGCGA TATGGGGCCC
AAGGCCTGCT ATTTGGGTGC GGATGTTCCG GATGAGGACC TAATCTGGCA GGATCCACTG
CCCGCCGTCG ATCACGCGCT GATCGAGGAG GCAGATATTG CGTCCCTCAA GGCAGACATT
CTCGCCTCCG GCCTTTCGGT CCAGGATCTG GTCTACGTTG CATGGTCTTC TGCGTCCACG
TTCCGCGGTT CAGACAAACG TGGCGGCGCC AATGGTGCCC GCATCCGCCT TGCGCCGCAA
AAGGACTGGG AAGTAAACGA ACCGGCCAAG CTGGAAAAAG TCCTGAATGC GCTCGAAGGT
ATTCAGTCTT CTTTCAACGC GGCCGCGTCC GGTGGCAAAA AGGTGTCATT GGCGGATTTG
ATCGTTCTTG CGGGCTCCGC AGCCGTTGAA AAGGCGGCCA AGGACGCCGG TTTTGACGTG
ACTGTGCCGT TCACACCCGG ACGCACCGAC GCCACGGACG AGCAGACAGA TGTTGAAAGC
TTTGACGTGA TGGAGCCGCA GATCGACGGG TTCCGCAACT ACGCGCCAAA GAAATTCTCG
GTCTCCACCG AGGAGATGCT GGTCGACAAA GCGCAGCTGC TGACACTTTC GGCGCCGGAA
ATGACGGTGC TGGTCGGTGG TCTGCGCGCA ATCGGAGCGA ACTATGGTGA CAGCGCCCAC
GGCGTTCTCA CTTCGCGCAA GGGCCAGTTG ACCAATGATT TCTTCGTCAA CGTGCTCGAT
CTCGGTACCA AATGGACCGC TACGGACGAC AGCGGCGAGA TCTTTGAAGG CGCAGACCGC
GCCACTGGCG AGGTCAAATG GACCGGCACC CGTGCCGACC TGATCTTTGG CTCCAACTCG
CAGCTGCGCG CTCTGTCCGA GGTCTACGCG CAGGACGACA ATGCGGGCAA AATGGTTGCC
GACTTCGTCA AGGCCTGGGT CAAGGTGATG GAACTGGATC GCTTTGATCT GAAGTGA
 
Protein sequence
MDGQDIGAGG GCPFSGANTN KGRRSNRDWW PNQLNLSILH QHQARQNPLG ETFNYAEAFK 
SLDLDAVKKD LIALMTDSQD WWPADYGHYG GLMIRMAWHS AGTYRTADGR GGASTGTQRF
APLNSWPDNG NLDKARMLLW PIKKKYGNAL SWADLMILAG NCAIESMGLK PFGFGGGRAD
VWEPEEDIYW GAEDEWLATS DHAQARYSGD RVLEDPLAAV QMGLIYVNPE GPDGNPDPIA
SGRDIRETFA RMAMNDEETV ALTAGGHTFG KAHGNGPVDA VGPEPEAAPI EAMGQGWLSS
HKSGKGVDTI TSGIEGAWTP NPIQWDMGYF DVLFGYDWEL TKSPAGAWIW HAKDLKEDDH
APEVDGSGKK VPIMMTTADM AMKMDPIYGP ISKRFHENPE EFAEAFKRAW FKLTHRDMGP
KACYLGADVP DEDLIWQDPL PAVDHALIEE ADIASLKADI LASGLSVQDL VYVAWSSAST
FRGSDKRGGA NGARIRLAPQ KDWEVNEPAK LEKVLNALEG IQSSFNAAAS GGKKVSLADL
IVLAGSAAVE KAAKDAGFDV TVPFTPGRTD ATDEQTDVES FDVMEPQIDG FRNYAPKKFS
VSTEEMLVDK AQLLTLSAPE MTVLVGGLRA IGANYGDSAH GVLTSRKGQL TNDFFVNVLD
LGTKWTATDD SGEIFEGADR ATGEVKWTGT RADLIFGSNS QLRALSEVYA QDDNAGKMVA
DFVKAWVKVM ELDRFDLK