Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2791 |
Symbol | |
ID | 4076559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2951135 |
End bp | 2953351 |
Gene Length | 2217 bp |
Protein Length | 738 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638008116 |
Product | catalase/peroxidase HPI |
Protein accession | YP_614785 |
Protein GI | 99082631 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0376] Catalase (peroxidase I) |
TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.258603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGGAC AAGATATTGG CGCAGGCGGC GGCTGCCCCT TTTCGGGCGC GAACACCAAC AAGGGTCGCA GATCAAACCG TGACTGGTGG CCGAACCAGC TCAACCTCTC GATCCTGCAT CAACATCAGG CGCGCCAGAA TCCGCTCGGC GAGACGTTCA ACTATGCCGA GGCGTTCAAG AGCCTCGATC TGGACGCTGT GAAGAAAGAC CTGATCGCGC TGATGACCGA CAGTCAGGAT TGGTGGCCAG CGGACTACGG TCACTATGGC GGGCTTATGA TCCGCATGGC TTGGCATTCG GCAGGGACCT ACCGGACCGC AGACGGTCGT GGCGGCGCCT CGACGGGCAC GCAGCGTTTC GCGCCACTGA ACTCCTGGCC GGACAACGGC AACCTCGACA AGGCGCGCAT GCTGCTGTGG CCGATCAAAA AGAAGTACGG CAATGCGCTC TCTTGGGCCG ATCTGATGAT CCTCGCGGGC AACTGCGCGA TCGAGTCCAT GGGGCTGAAG CCCTTTGGCT TTGGTGGTGG CCGTGCCGAC GTTTGGGAGC CCGAGGAAGA CATTTACTGG GGGGCTGAAG ACGAATGGCT TGCCACCTCG GATCACGCGC AGGCCCGCTA TTCCGGTGAT CGCGTGCTGG AGGACCCGCT GGCTGCCGTG CAGATGGGTC TCATTTACGT GAATCCCGAA GGGCCTGACG GGAACCCGGA CCCCATCGCA TCCGGCCGTG ACATTCGCGA GACCTTTGCC CGGATGGCGA TGAACGACGA GGAAACCGTG GCGCTGACCG CCGGGGGGCA CACCTTTGGC AAGGCGCATG GCAACGGCCC GGTGGACGCA GTCGGCCCCG AACCAGAAGC TGCGCCCATC GAGGCGATGG GTCAGGGCTG GCTCTCTTCG CACAAATCCG GCAAGGGCGT GGACACTATT ACCTCTGGGA TCGAGGGCGC TTGGACGCCG AATCCGATCC AGTGGGATAT GGGTTATTTT GATGTCCTGT TCGGCTATGA TTGGGAACTG ACCAAATCCC CGGCGGGTGC TTGGATCTGG CATGCGAAGG ACCTCAAAGA GGATGACCAC GCCCCCGAGG TGGACGGCTC CGGCAAAAAG GTCCCGATCA TGATGACCAC CGCCGATATG GCGATGAAGA TGGACCCGAT CTATGGGCCG ATCTCCAAGC GGTTCCATGA AAACCCGGAG GAGTTCGCCG AGGCCTTCAA GCGCGCATGG TTCAAGCTGA CGCACCGCGA TATGGGGCCC AAGGCCTGCT ATTTGGGTGC GGATGTTCCG GATGAGGACC TAATCTGGCA GGATCCACTG CCCGCCGTCG ATCACGCGCT GATCGAGGAG GCAGATATTG CGTCCCTCAA GGCAGACATT CTCGCCTCCG GCCTTTCGGT CCAGGATCTG GTCTACGTTG CATGGTCTTC TGCGTCCACG TTCCGCGGTT CAGACAAACG TGGCGGCGCC AATGGTGCCC GCATCCGCCT TGCGCCGCAA AAGGACTGGG AAGTAAACGA ACCGGCCAAG CTGGAAAAAG TCCTGAATGC GCTCGAAGGT ATTCAGTCTT CTTTCAACGC GGCCGCGTCC GGTGGCAAAA AGGTGTCATT GGCGGATTTG ATCGTTCTTG CGGGCTCCGC AGCCGTTGAA AAGGCGGCCA AGGACGCCGG TTTTGACGTG ACTGTGCCGT TCACACCCGG ACGCACCGAC GCCACGGACG AGCAGACAGA TGTTGAAAGC TTTGACGTGA TGGAGCCGCA GATCGACGGG TTCCGCAACT ACGCGCCAAA GAAATTCTCG GTCTCCACCG AGGAGATGCT GGTCGACAAA GCGCAGCTGC TGACACTTTC GGCGCCGGAA ATGACGGTGC TGGTCGGTGG TCTGCGCGCA ATCGGAGCGA ACTATGGTGA CAGCGCCCAC GGCGTTCTCA CTTCGCGCAA GGGCCAGTTG ACCAATGATT TCTTCGTCAA CGTGCTCGAT CTCGGTACCA AATGGACCGC TACGGACGAC AGCGGCGAGA TCTTTGAAGG CGCAGACCGC GCCACTGGCG AGGTCAAATG GACCGGCACC CGTGCCGACC TGATCTTTGG CTCCAACTCG CAGCTGCGCG CTCTGTCCGA GGTCTACGCG CAGGACGACA ATGCGGGCAA AATGGTTGCC GACTTCGTCA AGGCCTGGGT CAAGGTGATG GAACTGGATC GCTTTGATCT GAAGTGA
|
Protein sequence | MDGQDIGAGG GCPFSGANTN KGRRSNRDWW PNQLNLSILH QHQARQNPLG ETFNYAEAFK SLDLDAVKKD LIALMTDSQD WWPADYGHYG GLMIRMAWHS AGTYRTADGR GGASTGTQRF APLNSWPDNG NLDKARMLLW PIKKKYGNAL SWADLMILAG NCAIESMGLK PFGFGGGRAD VWEPEEDIYW GAEDEWLATS DHAQARYSGD RVLEDPLAAV QMGLIYVNPE GPDGNPDPIA SGRDIRETFA RMAMNDEETV ALTAGGHTFG KAHGNGPVDA VGPEPEAAPI EAMGQGWLSS HKSGKGVDTI TSGIEGAWTP NPIQWDMGYF DVLFGYDWEL TKSPAGAWIW HAKDLKEDDH APEVDGSGKK VPIMMTTADM AMKMDPIYGP ISKRFHENPE EFAEAFKRAW FKLTHRDMGP KACYLGADVP DEDLIWQDPL PAVDHALIEE ADIASLKADI LASGLSVQDL VYVAWSSAST FRGSDKRGGA NGARIRLAPQ KDWEVNEPAK LEKVLNALEG IQSSFNAAAS GGKKVSLADL IVLAGSAAVE KAAKDAGFDV TVPFTPGRTD ATDEQTDVES FDVMEPQIDG FRNYAPKKFS VSTEEMLVDK AQLLTLSAPE MTVLVGGLRA IGANYGDSAH GVLTSRKGQL TNDFFVNVLD LGTKWTATDD SGEIFEGADR ATGEVKWTGT RADLIFGSNS QLRALSEVYA QDDNAGKMVA DFVKAWVKVM ELDRFDLK
|
| |