Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2787 |
Symbol | |
ID | 4076555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2947018 |
End bp | 2947791 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638008112 |
Product | N-formylglutamate amidohydrolase |
Protein accession | YP_614781 |
Protein GI | 99082627 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3931] Predicted N-formylglutamate amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.288575 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCACA TGAATACAGA TACCTTTGCC TTTGATTTCG GTCCCTCGTT TGCCAAGACG CCATCCGCTG CGGAGGCTGA GGTCATCATC GTGTGCGAGC ACGCCGCCAA TTGGATTCCT CCCTCGCTTG ATGCGCTGGG GTTGGATGAT GCGGCGCGTG ACAGTCATAT CGCGTGGGAT CCGGGCGCGC TGGGCGTGGC GCGCAAATTG GCAGAGTTGC TCAAGGGGCC ATTAGTCGAG GGCTGTATCT CGCGTTTGGT TTACGACCTG AACCGTCCGC CCGAGTCGCC CACGGCGATT CCCCCGGCTT CCGAGATTTT TGACGTTCCA GGCAATCGAG ACCTGTCGGA CGCGGCGCGC GCGCAGCGGG TGGAGGCGGT GTATGAACCG TTCCGCGCCG CTTTGGCTGA GGAGATCGCG ACACGCGAGT CTGCTCTGCG CCTGATGGTC ACGGTTCATA GCTTCACCCC CGTCTACAAT GGTGAGACCC GTGCGGTTGA GCTTGGTCTC CTGCATGGTC GCGACGACCG TTTTGCCAAG GCAATGCTGG CGCATCAGCC AGAAGGCCTC GCTTGGGACG TGCGTCTCAA CGAGCCTTAC AGCGCCAGCG ATGGCGTCGC ACATACGTTG GACGTGCATG GCTGTGACAA TGGCTTGCTG AATGTGATGC TGGAGATCCG GAACGATCTG ATTGCAACGC CTGCGCAGCA GGACGCTTGG GCCACAGCGC TTGCACCCTG GATTCGCGCC ACACTGGAGG ACGCAGCCGT ATGA
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Protein sequence | MLHMNTDTFA FDFGPSFAKT PSAAEAEVII VCEHAANWIP PSLDALGLDD AARDSHIAWD PGALGVARKL AELLKGPLVE GCISRLVYDL NRPPESPTAI PPASEIFDVP GNRDLSDAAR AQRVEAVYEP FRAALAEEIA TRESALRLMV TVHSFTPVYN GETRAVELGL LHGRDDRFAK AMLAHQPEGL AWDVRLNEPY SASDGVAHTL DVHGCDNGLL NVMLEIRNDL IATPAQQDAW ATALAPWIRA TLEDAAV
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