| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2784 |
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| Symbol | |
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| ID | 4076552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2944029 |
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| End bp | 2945063 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638008109 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_614778 |
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| Protein GI | 99082624 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.968242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAC GTCGTAATTT TCTAAAGACC ACCGCCTTGG GCGCTGCCGC TGCACCGCTT
GCAGCGCCTG CGCTGGCGTC TGGTAAGATC ACATGGCGGA TGCAGACCTA CGCCGGTCCC
GCGCTTGCAG CGCATGTGAT CGACCCGGCG ATTGAAATGT TCAACAAGAT CGCAGGCGAC
CGCATGCAGA TCGAGCTTTT CTACGCCGAC CAGCTGGTCC CCACGGGTGA GCTGTTCCGT
GCCATGCAGA AAGGCACCAT CGACGCGGTA CAGTCTGATG ACGATTCCAT GGCGTCTCCG
ACAGAAGTGA CCGTTTTTGG CGGCTATTTC CCCTTTGCGT CGCGCTACTC GCTCGACGTG
CCGGTGCTGT TCAACCAGTA CGGCCTCAAC GAGATCTGGG ATGCGGAATA CTCCAAGGTG
GGCGTCAAGC ACATCTCCGC AGGCGCTTGG GATCCTTGCC ACTTTGCCAC CAAAGATCCG
ATCAACTCGC TTGAGGATCT CAAGGGCAAG CGCGTCTTCA CCTTCCCGAC TGCGGGCCGC
TTCCTGAGCC AGTTCGGCGT CGTGCCTGTC ACCCTGCCGT GGGAAGACAT CGAAGTTGCA
ATGCAGACCG GCGAGTTGGA TGGCGTTGCT TGGTCGGGCA TTACCGAAGA TTACACCGTG
GGTTGGGCCG ATGTGACCAA CTACTTCCTG ACCAACAACA TTTCCGGTGC ATGGGCAGGC
AGCTTCTTTG CCAACATGGA CCGTTGGAAC GAGCTGCCCG AAGATCTGCA GGCGCTGTTC
CGTGTCTGCA CCGACCAGTC GCATTACTAT CGCCAGTGGT GGTACTGGGG TGGCGAAGCC
TCCTTGCGCG TCAATGGCGA CAAGATGAAG CTGACCTCGA TCCCCGATGC AGAATGGCAG
CAGGTCGAAG ATGCCGCGGT AAAGTTCTGG GACGAGATCG CAGCCGAATC CGAAACCAAG
GCGAAGGTTG TCGAGATCTT CAAGAAGTAC AACGCCGATA TGGCGAAAGC CGGTCGTCCG
TATCGTTACG GCTGA
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| Protein sequence | MTTRRNFLKT TALGAAAAPL AAPALASGKI TWRMQTYAGP ALAAHVIDPA IEMFNKIAGD
RMQIELFYAD QLVPTGELFR AMQKGTIDAV QSDDDSMASP TEVTVFGGYF PFASRYSLDV
PVLFNQYGLN EIWDAEYSKV GVKHISAGAW DPCHFATKDP INSLEDLKGK RVFTFPTAGR
FLSQFGVVPV TLPWEDIEVA MQTGELDGVA WSGITEDYTV GWADVTNYFL TNNISGAWAG
SFFANMDRWN ELPEDLQALF RVCTDQSHYY RQWWYWGGEA SLRVNGDKMK LTSIPDAEWQ
QVEDAAVKFW DEIAAESETK AKVVEIFKKY NADMAKAGRP YRYG
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